Sorghum bicolor (sorghum): 8066855
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Entry
8066855 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8066855
04121 Ubiquitin system [BR:
sbi04121
]
8066855
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8066855
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8066855
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8066855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-Nse
Zn_ribbon_8
zf-RING_16
Anti-TRAP
HypA
Motif
Other DBs
NCBI-GeneID:
8066855
NCBI-ProteinID:
XP_002437660
UniProt:
C5Z218
A0A921TZH8
LinkDB
All DBs
Position
10:complement(44792..47834)
Genome browser
AA seq
321 aa
AA seq
DB search
MSSSPAALGFYCHQCDRNVSIAPPASPDADVLCPRCGGGFVEELPPNPSPPPPPPSAAFF
ASPSFDLRHPSDLSAFFGPTSPEPLAPGLFDPSNFLHDHFGGLLSGGATIQIVLEGGPGL
AAPPGLNLADYFVGSAGLEQLIQQLAENDPNRYGTPPAAKSAVASLPDVAVSADMMQADG
GAQCAVCMDDFHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPDYNHTHQ
QQHAASPAPAPAPAASSSPRVAERRFRISLPWPLRAAFGAAQAESSNPNNYDTPPSWSGG
NDNDNDAGGGPQSQTGYDDLD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctccccggcggcgctgggcttctactgccaccagtgcgaccgcaacgtctcc
atcgcccctcccgcatcccctgacgccgacgtcctctgcccccgctgcggcggcggattc
gtcgaggagcttcctcccaaccctagccccccgcctccgcccccgtccgccgccttcttt
gcctcgccctccttcgacctccgccaccccagcgacctctccgccttcttcggccccacc
tcccccgagccgcttgccccaggcctcttcgacccctccaacttcctccacgaccacttc
ggcggcctactctccggcggtgccaccatccagatcgtcctcgagggtgggcccggcctc
gccgcgcccccgggcctcaaccttgctgactactttgtcggctccgccggcctcgagcag
ctcatccagcaactcgccgagaacgaccccaaccgctacggcacccctcccgccgccaag
tccgccgtcgcctcgctccccgacgttgcagtgtcagccgacatgatgcaggccgacggc
ggcgcccagtgcgccgtctgcatggacgacttccacctcggcgccgccgccaagcagctc
ccctgcaagcacgttttccacaaggactgcatcctcccgtggctggacctccacagctcc
tgcccggtctgccgcttcgagctgcccaccgacgatcccgactacaaccacacccatcag
cagcagcacgccgcgtctccagctcctgctcctgctcctgcggcctcctcctcccccagg
gtggctgagcggaggttcaggatttcgctgccctggcctctcagggccgcctttggtgct
gctcaggcagagagcagcaatcccaacaactatgacacacctccatcttggtctggcggc
aacgataatgacaatgatgcaggtggtggccctcaatctcagactggttacgatgatctt
gactga
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