Sorghum bicolor (sorghum): 8066904
Help
Entry
8066904 CDS
T01086
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8066904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8066904
03110 Chaperones and folding catalysts [BR:
sbi03110
]
8066904
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8066904
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8066904
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8066904
Messenger RNA biogenesis [BR:
sbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8066904
Chaperones and folding catalysts [BR:
sbi03110
]
Heat shock proteins
HSP60 / Chaperonin
8066904
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8066904
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8066904
Exosomal proteins of other body fluids (saliva and urine)
8066904
Exosomal proteins of breast cancer cells
8066904
Exosomal proteins of colorectal cancer cells
8066904
Exosomal proteins of bladder cancer cells
8066904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8066904
NCBI-ProteinID:
XP_002437709
UniProt:
A0A921Q152
C5Z2S4
LinkDB
All DBs
Position
10:complement(976891..981911)
Genome browser
AA seq
579 aa
AA seq
DB search
MASTFGATSTVGLMAAPAGKNVRLQRRANFRVKAAKELYFNKDGSAIKKLQTGVNKLADL
VGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAG
DGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELRKLSKDVEDSELADV
AAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENFLYVVEGMQFDRGYISPYFVTD
SEKMSAEYENCKLLLVDKKITNARDLINVLEEAIRGAYPILIIAEDIEQEALATLVVNKL
RGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVGLSLDKADKSVLGTAAKVVLTK
ESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIAKLAGGVAVIQVGAQTET
ELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRR
ALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAATGQHEDLMAAGIIDPTKVVRCCL
EHAASVAKTFLTSDVVVVDIKEPEAAPLANPMDNSGYGY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacattcggtgccacttctacagttggccttatggctgctccagcagggaag
aatgtgcgccttcagaggagggctaacttcagagtaaaagcagccaaggagctgtacttc
aacaaggatggctcagctatcaagaagctccagactggagtcaataagcttgcagaccta
gttggagttacacttggaccaaagggaaggaatgtcgttttggagagcaagtatggctct
cctaagattgttaacgatggtgttacagttgcaagagaggttgagctggaggaccctgtg
gaaaacattggagctaaattggtcaggcaagctgcagctaagaccaatgatctagctgga
gatgggacaaccacctccgtggtccttgctcagggactgattgctgagggtgttaaggtt
gtggcagctggtgctaatcctgttcagattactcgtggtattgagaaaacagcgaaagca
ctagttgaagaactacgtaagttgtccaaggatgttgaagatagcgagcttgcagatgtt
gctgcagttagtgctggcaacaactatgaaatcggtaacatgatagcagaggccatgagc
aaggttggtcggaagggtgtggttacccttgaagagggaaggagttctgagaactttctc
tatgttgtggagggaatgcagtttgaccgtggttatatctctccctactttgtaacagac
agtgagaaaatgtctgccgagtacgagaactgcaagcttcttttggttgacaagaagatc
accaatgcaagggatcttatcaacgttttggaagaagccatcagaggtgcatacccaatc
ctgataattgctgaggatattgagcaggaggctcttgctactcttgttgtcaacaagctt
agaggatcattgaagattgctgccatcaaagcccctggttttggagagcgcaagactcag
tacttggatgatattgccatccttactggagcaactgtaatcagagatgaagttgggctg
tcacttgacaaggctgacaaatcagtccttggaacagctgcaaaggttgttcttaccaaa
gagtcaacaacaattgttggtgacggcagcacccaggaagaagttactaaaagggttgcg
cagattaaaaatctgattgaggcagcagaacaagaatatgaaaaggaaaagctcaatgag
aggatagctaagcttgctggtggtgttgctgtcattcaggtgggagcacaaacagaaact
gaactaaaagagaagaagttgagagttgaggatgccctaaatgcaactaaggctgctgtt
gaggaaggtattgttgttggtggagggtgcactcttttgcggcttgcagctaaagtcgat
gccatcaaagatacactggagaatgatgagcagaaggttggagctgaaatagtaagaagg
gccctgagctacccacttaaattgattgctaaaaacgctggtgtcaatggcagcgttgtc
actgagaaggtcctttctaacgataacttcaagtatggttacaatgctgctactggacag
cacgaggacttgatggctgctggtatcattgaccccaccaaggtggtgagatgctgcttg
gagcatgccgcatcggtggccaagaccttcctgacatcagatgttgtggtcgtcgatatc
aaggagccggaggccgcgcccctcgctaacccgatggacaactctggctatggatactga
DBGET
integrated database retrieval system
