Sorghum bicolor (sorghum): 8067008
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Entry
8067008 CDS
T01086
Name
(RefSeq) peroxisome biogenesis protein 5 isoform X1
KO
K13342
peroxin-5
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8067008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8067008
Membrane trafficking [BR:
sbi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
8067008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_11
TPR_1
TPR_2
TPR_17
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_19
TPR_9
TPR_7
TPR_12
PPTA
TPR_20
PsiA
PEX18_PEX21_C
TPR_10
Motif
Other DBs
NCBI-GeneID:
8067008
NCBI-ProteinID:
XP_002445936
UniProt:
C5YJ82
A0A921QMW9
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All DBs
Position
7:complement(64521781..64529711)
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AA seq
734 aa
AA seq
DB search
MALRHLVTGQNNCTPDGASSSNPLNALANAFLGQSSKAQSIKELPGSVSVPSTSDFSTPA
PISNIPGAENEFKQDQRPLARGADFIRGGPANDWIESFRPPGVPQLGVEAQFRDFEQIYN
NTGTTFQPPLDGPPQRVLSGVLHSFLTSGPAGVPFQPLPVPAALGLSESDKQCIRDRSCI
MARHIFSDQPEEYIQAQVNTLLHSLDIDNRMRGPMHGHYPELQEYWNQSQSSMGPAPMHN
AADKWITEFDKQNNNPENWANSFEQQYGPNGWASEFEQHQSQMAMGPMGGANMGNLAAME
QSRMLAQTLASNNDPKFQNSKFFQFVSKMSRGELIIEDNQVKEGSASQSSGWADEFQTQY
NANANSWADQFEHEELSHGADKWVSEFSSQHNQGALNENWVDEFSKLNVTDEWAEEFSGG
GFGESSADPWVDEFQEHMSSFKQSSGTSRGVYVFSENNPYVGHPNPMQEGQELFRKGLLS
EAVLALEAEVLKNPDNAEGWRLLGVTHAENDDDQQAIAAMMRALEANPTNLEILLALGVS
HTNELEQGEALRYLSRWLQNHPKYGGLVPPQSTDSPYGPDVVRLFNEAAQMSPEDADVHI
VLGVLYNLSREYDKAIASFKTALQLKPQDYSLWNKLGATQANSIQSADAILAYQQALDLK
PNYVRAWANMGISYANQGLYEDSIRYYVRAVAMNPKADNAWQYLRISLSNASRADMIAAC
DARNLDALQKEFPL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggcacctcgtcacgggccagaacaactgcaccccggacggcgcctcgtcc
tccaaccccctcaacgccctcgccaacgccttcctcggccagtcctccaaggcgcagtca
ataaaggaacttcctggttctgttagtgttccatctacatcagactttagcacgcctgct
cccatatcaaacatccctggtgcagaaaatgagttcaaacaagaccagcgacctcttgca
cggggcgctgactttattcgtggtggtcctgctaatgattggatcgagtcttttcggcct
ccgggggttcctcaacttggagtagaagcacaattccgagattttgagcaaatttataac
aatacagggacaacctttcaaccgccattggatggtccaccacaaagagtgttgtctggt
gtcttgcattcctttctcacaagtggcccagctggtgtgccatttcaacctcttcctgta
ccagctgctcttggtttatctgaaagtgacaaacagtgcatacgtgatcgtagctgcata
atggcacggcatatattttctgaccaaccagaagaatatatacaggctcaggtcaatact
ttgctgcattcgcttgatattgacaaccgtatgagaggacctatgcatggacattaccca
gaactacaggagtactggaaccagtcccaaagttctatgggtcctgccccgatgcataat
gctgctgataaatggattactgagtttgacaagcaaaataataatccagaaaattgggca
aactctttcgaacaacaatatggccccaatgggtgggcctctgagtttgaacagcatcag
tctcagatggccatgggcccgatgggaggagcaaacatgggcaacctggctgctatggag
caatcccgaatgcttgcacaaactttagcaagtaataatgatcccaagtttcagaattct
aagttcttccagtttgtttcaaagatgagccggggtgaacttattatagaagataatcaa
gtaaaagaaggttcagcatcccaatccagtggctgggctgatgaatttcaaacacagtac
aatgctaatgcaaactcatgggcggatcagtttgagcatgaagagctttcacatggggcg
gataagtgggttagcgagttctctagtcaacataatcaaggtgcactaaatgagaactgg
gttgatgagttctcgaaattaaatgtcactgatgaatgggcagaggaattcagtggaggt
ggttttggtgaaagctctgctgatccatgggttgatgagttccaagaacacatgtcgtct
ttcaaacaaagttcgggcacctctcgaggggtttatgttttttctgagaacaacccgtat
gttggtcaccctaatccaatgcaggaaggacaggagctcttccgcaagggcctcttaagt
gaagctgttcttgctttagaggctgaagttttgaagaatcctgataatgctgaaggttgg
aggttgttaggcgtaacacatgcagaaaatgatgatgaccagcaggccattgcagcaatg
atgcgtgcgttggaagctaatccgacaaaccttgaaattcttcttgctcttggtgttagt
cacacaaatgaattggagcagggagaagcgttaaggtatctttctaggtggcttcagaat
catccaaaatatggtggccttgtccctccgcagtcaactgattcaccttatggtcctgat
gttgttagattgtttaatgaagctgctcagatgtcacctgaagatgcagatgttcatata
gttctgggagtcttatacaacctatcaagagagtatgataaagctatagcttcatttaag
acagcactgcagctcaaaccacaggactattcactctggaacaagcttggtgcaacccaa
gcaaacagcatccagagtgctgatgcaatattggcgtatcagcaggctctagacttgaaa
cccaactatgtgcgtgcatgggcgaatatgggaatcagctatgccaaccagggtttgtat
gaggattccattcggtactatgtaagggcagttgcaatgaacccaaaagctgacaatgcc
tggcagtacttgaggatttctcttagcaatgcttcgcgagctgacatgattgctgcatgc
gacgcccgcaaccttgacgctcttcagaaagagtttcctctgtga
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