Sorghum bicolor (sorghum): 8067315
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Entry
8067315 CDS
T01086
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8067315
04121 Ubiquitin system [BR:
sbi04121
]
8067315
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8067315
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8067315
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8067315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
DUF7129
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
8067315
NCBI-ProteinID:
XP_002439130
UniProt:
C5YYG0
LinkDB
All DBs
Position
9:975775..977894
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AA seq
413 aa
AA seq
DB search
MATPSSPSPTHSPTSSSSSYWCYQCDRFVRATAAPASPACPSCGGGFLEEMGAPPPPRPA
YLRRHRAHNHHHHHHHHHHHIAAAAADLRPRRARRGASGSTDSRASPFNPVIVLRRSPPT
TAADGSSSPTATAGGSTFELFYDDGAGSGLRPLPDSMSDFLMGSGFERLLDQLAQIEAGG
LAAARARDAPPASKAAVESMPVVSVGASHVAADAHCAVCKEAFELGAEAREMPCAHIYHA
DCILPWLAIRNSCPVCRHEMPTDATPRAAANAGAAGEEEEATVGLTIWRLPGGGFAVGRF
AGGRRPEERELPVVYTEMDGGFNSGGAGAPRRISWGSRQTASTDRGTVRRFLRNVFACFG
GRGSAASRSHAMPELDDDDASDHSAAFSRGGSRSRSTSWRLEDGHAADAMVQR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgtcctccccctccccgacccactccccgacctcctcctcctcctcctac
tggtgctaccagtgcgaccgcttcgtgcgggccaccgccgctcccgcctccccagcctgc
ccttcctgcgggggcggcttcctcgaggagatgggcgcgccaccaccaccacgaccagcc
tacctccgtcgccaccgcgcgcacaaccaccaccaccaccaccaccaccaccaccaccac
atcgccgccgcagcagccgacctccgcccccgccgcgcgcgccgcggcgccagcggctcg
accgactcccgcgcctcgccgttcaaccccgtcatcgtgctccgccgctcccctcccacc
accgccgccgacggctcctcctcccccaccgccaccgccggcgggagcaccttcgagctg
ttctacgacgacggcgcggggtcaggtctccgcccactccccgacagcatgtcggacttc
ctcatgggttccggcttcgagcgtctgctagaccagctcgcgcagatcgaggcgggcggg
ctcgccgccgcgcgcgcccgcgacgcgcccccggcgtccaaagccgccgtcgagtccatg
cccgtggtgtccgtcggggcctcccacgtcgccgccgacgcgcactgcgccgtctgcaag
gaggccttcgagctcggggctgaggccagggagatgccgtgcgcgcacatctaccacgcc
gactgtatcctgccatggctcgcgatacgcaactcctgccccgtctgccgccacgagatg
cccaccgacgccaccccgcgcgccgctgccaacgctggggcagccggggaggaggaggag
gcgacggtcgggctcaccatctggaggctccccggcggcgggttcgcggtggggaggttc
gcgggcgggcggaggcctgaggagcgcgagctgccggtggtgtacacggagatggacggc
gggttcaacagcggcggcgccggcgcgccccgccggatctcctgggggtccaggcagacg
gcttccacggacaggggcaccgtccgccgcttcctccgaaacgtcttcgcctgctttggt
ggacgcgggtcggcggcatcgcggtcgcacgccatgcctgagctcgacgacgacgacgcg
tctgatcatagtgcagccttcagccgtggtgggtccaggagccgcagcaccagctggaga
ctcgaggacggccatgccgccgacgccatggtgcagagatga
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