Sorghum bicolor (sorghum): 8067324
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Entry
8067324 CDS
T01086
Name
(RefSeq) chitinase 12
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00520
Amino sugar and nucleotide sugar metabolism
sbi01100
Metabolic pathways
sbi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8067324
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
8067324
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
8067324
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GFIT
Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
CHASE
Motif
Other DBs
NCBI-GeneID:
8067324
NCBI-ProteinID:
XP_002439136
UniProt:
A0A921Q747
C5YYH5
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Position
9:1065747..1066706
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AA seq
319 aa
AA seq
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MRALLAVATMVATVFLSMSSSSTHAQQCGTQAAGALCPNCQCCSMYGWCGSTSDYCGSGC
QSQCTGTCGGGGVASIISESVFNQMLLHRNDAGCPANGFYTYAAFIAAANSFPGFGTTGA
SPDVQKRELAAFLAQTSHETTGGWATAPDGAYAWGYCFKEEKDGASGPDYCEPSTQWPCA
AGKKYYGRGPIQISYNYNYGPAGQAIGAGILANPDLVAADATVSFETAVWFWMTPQSPKP
SCHDVMTGQWTPSAADIAAGRLPGYGVVTNIINGGLECGHGADTRVADRIGFYKRYCDLL
GVSYGDNLDCANQMPFNSS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagagcactgctggcggtggcgaccatggtggccactgtcttcttgtccatgtcgtcg
tcgtccacgcacgcccagcagtgcggcacgcaggccgccggcgcgctgtgccccaactgc
cagtgctgcagcatgtacgggtggtgcggcagcacctccgactactgcggcagcggctgc
cagagccagtgcaccggcacctgcggcggcggcggcgtggcgtccatcatctccgagtcc
gtcttcaaccagatgctgctgcaccgcaacgacgccggctgccctgccaacggcttctac
acctacgccgccttcatcgcggcggccaactccttcccgggcttcggcacgacgggggcg
agccccgacgtccagaagcgcgagctggcggcgttcctggcgcagacgtcgcacgagacg
acgggcgggtgggcgacggcgcccgacggcgcctacgcctggggctactgcttcaaggag
gagaaggacggcgcgtcggggccggactactgcgagcccagcacacagtggccgtgcgcc
gccgggaagaagtactacggccgcggacccatccagatctcctacaactacaactacggc
cccgccggccaggccatcggcgccggcatcctcgccaacccggaccttgtcgccgccgac
gccaccgtctcgttcgagaccgcggtgtggttctggatgacgccgcagtcgcccaagccg
tcgtgccacgacgtcatgacggggcagtggacgccgtcggcagctgacatcgccgcgggg
aggttgccggggtatggcgtcgtcaccaacatcatcaacggcggcctcgagtgcggccat
ggcgccgatacccgcgtcgcggacaggatcgggttctacaagcgctactgcgacttgctt
ggggtcagctatggcgacaacttggactgcgccaaccagatgcccttcaacagctcctaa
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