Sorghum bicolor (sorghum): 8067387
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Entry
8067387 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8067387
04121 Ubiquitin system [BR:
sbi04121
]
8067387
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8067387
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8067387
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8067387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_1
Zf_IFT144_1st
Anti-TRAP
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
8067387
NCBI-ProteinID:
XP_002467049
UniProt:
A0A921S095
LinkDB
All DBs
Position
1:complement(19642486..19646770)
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AA seq
398 aa
AA seq
DB search
MSTPAAAYYAAAARKQYFCYQCNRTVLIAVSAAAAGELSCPECHGDFVEEVTVPAPTFIP
LPFPFPFASSTTIPAGSNAPAPAPAPAAAGSGGSPTFSSSSSSAATSPSQPNDISSILSI
FLGLGQQHPIRSGGGGGGSGSRAAAGTATPENEPEPFDPVMFFQNYIHSLMEGGANIQVL
LDDASVNLGSGPGLGRFGGASFGDYFVGPGLEQLIEQLAENDPNRYGTPPAAKSALSSLP
DVVVTHTMVAAAEGAECAVCKEDFSPGEVAKQMPCKHIYHTDCIVPWLELHNSCPICRFE
LPTDDPDYEGRKGSNPPQPAVGIAAAAAASGSSTAADGQMEERQDNPRVVERRFNVSLPW
PFSGLSGQTSQQDGNNGGSGSNSQGSGSQDGGPPSSKN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccagccgccgcctactacgccgccgccgcgcgcaagcagtacttctgctac
caatgcaaccgcaccgtcctcatcgcggtctccgccgccgccgccggtgagctctcgtgc
cccgagtgccacggcgacttcgtcgaggaggtcaccgtccctgcccccaccttcatcccg
ctccccttcccgttccccttcgcctcctccaccacgatccccgctggcagcaacgccccc
gcccccgcccccgccccagcagcagccggctccggcgggtcccctaccttctcgtcctcg
tcctcctccgccgcgacctccccgtcccagcccaacgacatctcctccatcctcagcatc
ttcctcggactcggccaacagcaccccatcaggtccggcggcggcggcggcggctccggc
tcgcgcgccgccgccggcacggccacccccgagaacgagccggagcccttcgatccggtc
atgttcttccagaattacatccacagcctcatggaggggggcgccaacatccaggtcctc
ctcgacgacgccagcgtcaacctcggctccgggcccggcctcggtcgcttcggcggggca
agctttggggattacttcgtcggcccgggcctcgaacaactcatcgagcagctcgccgag
aacgaccccaaccgctacggcacgccgccggctgccaagtcggccctctcctcgctcccc
gatgttgtcgtgactcacaccatggttgcagctgcggagggcgctgagtgcgccgtctgc
aaggaggatttctcgcctggggaggtggccaagcagatgccctgcaagcacatctaccac
accgactgcatcgtgccgtggcttgagcttcacaactcgtgccccatctgccgctttgag
ctgcccactgatgatcctgattatgaggggcggaagggctctaatcctcctcagccggct
gttggtattgctgctgctgctgcggcatctgggagctctactgctgctgatggacaaatg
gaggagaggcaggataatccaagggtggttgagaggaggttcaatgtgtcgctgccatgg
ccgttcagtggattgagtgggcaaacatcgcagcaggatgggaacaatggaggcagtggt
agcaactcacaaggcagtggctcgcaagatggtggcccacccagcagcaagaattga
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integrated database retrieval system
