Sorghum bicolor (sorghum): 8067475
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Entry
8067475 CDS
T01086
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8067475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8067475
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8067475
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
8067475
NCBI-ProteinID:
XP_021303618
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Position
9:54092359..54096494
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AA seq
710 aa
AA seq
DB search
MSSDLSARSSALSSSTASPSDDSRRKEQGRHATTNGSGSGSSSGRRGSHWRSQRVQWLGG
AGAAWAVDPRARWVRDWNRAYLLACAAGLMVDPLFLYAVSLSGPLMCLFVDGWLAAAVTA
LRCAVDAMHVWNVATQLRLRVARAGAGAGATPGSKRVASGAGDEEQQQQQGAEDDDEEAA
AEAARKLPEESRKGMLLDFFVILPVMQVVVWVAAPAMIRAGLTTPVMTVMLVAFLLEYLP
KIYHAARLLRRTQRQSGYIFGTIWWGIALNLMAYFVAAHAVGACWYLLGVQRASKCLKEQ
CLQAAAAGGCARSSAVACAAPLYYGGSPSTSGVIGSGDRLAWSRNAQARGTCLSSGGGGG
DNYQYGAYSWTVMLVANPSRVERMLLPIFWGLMTLSTFGNLESTTEWVEIVFNIVTITGG
LVLVTMLIGNIKVFLNATTSKKQAMHTRLRSVEWWMKRKNLPRSFRARVRQFERQRWAAT
RGVDECQIVRDLPEGLRRDIKYHLCLDLVRQVPFFQHMDDLVLENICDRVKSLIFPKGET
IVREGDVVQRMLFIVRGHLQCSQVLRNGATSSCTLGPGNFSGDELLSWCLRRPFLERLPT
SSATLVTLESTEVFGLDAADVKYVTQHFRYTFTNDKVRRSARYYSPGWRTWAAVAVQLAW
RRYKHRKTLSSLSFIRPRRPLSRCSSLGEEKLRLYTAILTSPKPNQDDDF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgacctctccgcacgctcgtcggcgctttcctcctccaccgcgtcgccttcc
gacgactcgcggcggaaggagcaaggacggcatgcgacgaccaacggcagcggcagcggt
agcagcagcgggcgccgggggagccactggcggagccagcgcgtgcagtggctcggcggc
gccggcgcggcgtgggcggtggacccgcgcgcgaggtgggtccgggactggaaccgcgcc
tacctcctggcgtgcgcggcggggctgatggtggacccgctcttcctgtacgccgtgtct
ctgagcggcccgctcatgtgcctcttcgtcgacggctggctcgccgccgccgtcaccgcg
ctgcgctgcgccgtggacgccatgcacgtgtggaacgtcgccacgcagctccgcctccgc
gtcgcgcgcgccggcgccggcgccggcgcgacgccgggtagtaagcgcgtggccagcggc
gcgggcgacgaggagcagcagcagcagcagggcgccgaggacgacgacgaggaggccgcc
gccgaggccgcgcgcaagctccccgaagagtccaggaaagggatgctgcttgacttcttc
gtcatccttcccgtgatgcaggtggtggtgtgggtagcggcgccggcgatgatccgcgcg
gggttgacgacgccggtgatgacggtgatgctggtggcgttcctgctcgagtacctgccc
aagatctaccacgcggcgcgcctgctccggcggacgcagcgccagtccggctacatcttc
ggcaccatctggtggggcatcgcgctcaacctcatggcctacttcgtcgccgcccatgct
gtgggggcgtgctggtacctgctcggcgtgcagcgggccagcaagtgtctgaaagagcag
tgcctccaggcggcggcggccggcgggtgcgcgcgcagcagcgcggtggcctgcgcggcg
ccgctgtactacggcggctccccttccacctccggtgtcatcggcagcggcgacaggctc
gcctggtcccggaacgcgcaggcccggggcacgtgcctgtccagcggcggcggcggcggc
gacaactaccagtacggcgcgtactcgtggacggtgatgctggtggcgaacccgagccgc
gtggagcggatgctgctcccgatcttctggggcctcatgacgctcagcacgttcggcaac
ctggagagcacgacggagtgggtggagatcgtgttcaacatcgtcaccatcacgggcggg
ctcgtcctcgtcaccatgctcatcggcaacatcaaggtgttcctgaacgcgaccacgtcc
aagaagcaggccatgcacacgcggctccgcagcgtggagtggtggatgaagcgcaagaac
ctgccccggagcttccgcgcccgtgtgcgccagttcgagcgccagcggtgggccgccacc
cgcggcgtcgacgagtgccagatcgtgcgcgacctccccgagggactccgccgggacatc
aagtaccacctctgcctcgacctcgtccgccaggtccccttcttccagcacatggacgac
ctcgtcctcgagaacatctgcgacagggtcaaatccctcatcttccccaagggagaaacc
atcgtgagggagggagacgtggtgcagcggatgctgttcatcgtgaggggccacctgcag
tgcagccaggtgctgcggaacggggcgacgagcagctgcacgctggggccaggcaacttc
agcggcgacgagctgctgtcgtggtgcctgcggcggccgttcctggagcggctcccgacg
tcgtcggcaacgctggtgacgctggagagcacggaggtgttcggactggacgccgccgac
gtcaagtacgtgacgcagcacttccgctacaccttcaccaacgacaaggtgcgccgcagc
gcgcgctactactcgccggggtggcgcacctgggcggccgtcgccgtgcagctggcatgg
cggaggtacaagcaccgcaagacgctctcgtcgctgtccttcatccgcccgcggcgaccg
ctgtcccgctgctcgtcgctcggggaggagaagctccgcctctacaccgccatcctcacc
tcgcccaagcccaaccaggacgacgacttctag
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