Sorghum bicolor (sorghum): 8067925
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Entry
8067925 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP35 isoform X1
KO
K14313
nuclear pore complex protein Nup53
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8067925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8067925
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8067925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
8067925
NCBI-ProteinID:
XP_002441400
UniProt:
C5Z1B7
A0A921QEH7
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All DBs
Position
9:complement(55116382..55122716)
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AA seq
326 aa
AA seq
DB search
MAASSHSLAASRRGRSARQAPFFRDLATPIPSHRGVSRFASGASPSAAPSATPPPPPIFT
LDDRYAAADFSPDPTASDLLPVASSPSPRAAASRSPPWDLSRGKVSLSPPGSPMVGVVEP
ARKEVLALPPPGSPGAPPPATTAEAQSPVSPAQAPARMEPVANGGEVEREEWVTVFGFSI
GDTNLVLREFEKCGVILRHHSGPRDGNWIHILYQRSYDAQKALQKNGIQLSSGLIVGVKP
IDAVHRQQLDESFVRNSQGGFMVSLPSKSLGLKSTGASHQLGALPRPYDPKASTNVSRDA
GRRATGSVAAPAKSIVTNVMDLIFGI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcctcccactccctcgccgcctcgcggcgcggacgcagcgcgcggcaggcg
cccttcttccgcgacctcgccaccccgatcccgtcccaccgcggcgtgtcccgcttcgcc
tcgggggcttccccctcggctgccccctccgctacgccgccgccgccgcccatcttcacc
ctcgacgaccgctacgccgccgcggacttctccccggaccccaccgcctctgacctcctc
cccgtcgcgtcgtccccctcaccgcgcgccgccgccagccgctcgccgccatgggacctg
tcccggggcaaggtgtcactctcgccaccaggatcccccatggttggggtcgtcgagccg
gcccggaaagaggtgctcgctttgccgccgcccgggagccctggcgccccacctcctgct
acgacagcggaggcgcagtcaccggtgtcccccgcgcaggcaccggctaggatggagccg
gtggcgaacggaggggaggtcgaacgggaggagtgggtcactgtattcggattttctatt
ggagataccaaccttgttcttcgggaattcgagaaatgtggagtaatattgagacatcac
tctggtccaagagatgggaattggatccacatattgtaccagcgctcttatgatgctcaa
aaggcccttcagaaaaatggtatccaactaagcagcggtctgatagttggcgtaaagcct
attgatgcagtgcaccggcagcagctggatgagagtttcgtgcgaaacagtcaaggtgga
tttatggtttccttgccttcaaagtcacttggcttgaagagcacaggtgcatcgcaccag
ttaggagccttgccccgcccatatgacccaaaagctagcacaaatgttagccgagatgca
ggccgtcgtgcaactggcagcgttgctgcaccagcaaaatcaattgtaaccaatgtgatg
gatttgatatttggcatttga
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