KEGG   Sorghum bicolor (sorghum): 8068027
Entry
8068027           CDS       T01086                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8068027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8068027
Spliceosome [BR:sbi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    8068027
 Complex B
    8068027
 Complex C
   U2 SnRNP specific factors
    8068027
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 8068027
NCBI-ProteinID: XP_002456152
UniProt: C5XGS1 A0A921RER5
LinkDB
Position
3:59692457..59701066
AA seq 504 aa
MASTVLEATRAAHEDLERLERLAVRELQRDPANPRDRLFQSHRVRHMLDLVVSTSGKLVE
IYEDKDNARKDEINTHLTAPTQSGLFSKYYERLKEIREYHRRNPSARFVSTTDDYEELLK
EEPIIEFTGEESFGRYLDLHELYNEFINSKFGTPMEYSAYVGCFSQTDKISHSHKATRQY
REYLEHILEYLTSFLYRTEPLQDIDKIFLKLESEFEERWANGEIPGWGNKGAEKESEIDL
DYYSTVEELVELGPEKLKQALAARGLKSGGTVQQRADRLFLLKLTPLEQLDRKHFAKVPH
TKDGSNTASNGNTLKDDMKKEIALMEVKMKRLCELLDEAFVRTKENAEKKLTLTYEEMEA
EREEEEVQADSESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYW
GRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIDEAKALWEKIQARQGVNKWRPDLEE
EYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgtcaacggtgctggaggcgacgcgggcggcccatgaggacctggagaggctggag
cggctcgcggtgcgcgagctgcaaagggatcccgctaacccgcgcgaccgcctctttcag
tctcaccgcgtccgccatatgctcgacctcgtcgtctccacctccggcaagctcgtggaa
atctacgaggacaaggacaatgctaggaaggatgagatcaatactcatcttactgcgccc
acgcaaagtggactgtttagcaagtactatgaaaggctcaaagagatccgtgaatatcat
cggcggaacccatctgcccgttttgtcagtacaactgatgactatgaagagcttctaaag
gaggaaccaattattgaattcactggcgaggaatcttttggtcgttaccttgacttgcat
gagctttataatgagttcataaattccaagtttggaacgccaatggaatactcggcttat
gttggctgtttctcccagacggacaagatctcacatagtcataaagctaccagacaatac
agagaatacttggaacacattttggaatatctgacgtcatttctgtatcgcacagaacca
ttgcaagacattgataagatttttttaaagctggagagtgaattcgaggaacgatgggcc
aatggagaaatacctggatggggaaataaaggcgcagaaaaagagtctgaaatagatctt
gattactacagcacagttgaagaacttgttgagcttggcccagaaaaattaaaacaggct
ttagctgctcgaggtttgaagagtggtggtactgttcaacagcgtgcggatcggcttttc
ttgctgaagcttacaccattggagcaactggataggaagcattttgccaaagttccacat
actaaagatggctcaaacacagcttctaatggcaacactttgaaggatgatatgaagaaa
gaaattgcattgatggaagtaaagatgaagcgtctttgtgagctgctagatgaggccttt
gtgaggacaaaggaaaatgcggagaagaagcttactttgacgtatgaagagatggaagca
gaacgggaggaggaggaggtgcaagctgactctgagagtgatgatgaagagcaacaaatc
tacaatcctctcaagttgccaatgggttgggatggcaagcctatcccctattggctgtac
aagctacatggccttgggcaggaattcaagtgtgagatatgtggaaaccatagctattgg
gggcgaagggcttatgagcgtcatttcaaggaatggcgtcatcagcatgggatgcgatgc
cttggcattcccaatactaagaatttcaatgaaattacatccatcgatgaagcgaaagcg
ctctgggagaaaattcaagcacgacaaggggtgaacaagtggcggccagacctagaggaa
gagtacgaggatcaagaaggcaacatctacaacaagaagacatacactgacctgcagcgt
caaggcctgatctag

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