Sorghum bicolor (sorghum): 8068071
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Entry
8068071 CDS
T01086
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00900
Terpenoid backbone biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8068071
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbi01006
]
8068071
Enzymes [BR:
sbi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8068071
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8068071
Prenyltransferases [BR:
sbi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8068071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
8068071
NCBI-ProteinID:
XP_002456217
UniProt:
C5XHL1
A0A921RFB7
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All DBs
Position
3:60723772..60727929
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AA seq
356 aa
AA seq
DB search
MATAEVVVVANGSGGADTKAAFKETYSKLKEEMLQDPAFEFTDESLQWIDRMVDYNVLGG
KCNRGLSVIDSYKILKGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQP
CWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVEFKTASGQLLDLI
TTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLAGENLDNFGDVKNILVEMGT
YFQVQDDYLDCFGDPEFIGKIGTDIEDYKCSWLVVQALERADENQKSILCENYGKSDPAC
VAKVKDLYKELKLEEVFHEYERESYNKLIADIEAQPSKAVQTVLKSFLHKIYKRDK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggaggtggtggtggtggccaacggctccggcggcgccgacaccaaggcc
gcgtttaaggagacatacagcaagctcaaggaggagatgctccaggaccccgccttcgag
ttcaccgacgagtcgctccagtggatcgaccgcatggtggattacaatgtgctcggtgga
aagtgcaaccgtgggctctctgtcatcgatagctacaagatattgaagggtgttgatgtt
ctgagcaaggaggagacatttcttgcctgcacccttggctggtgtatcgaatggcttcaa
gcttattttcttgtgcttgatgatattatggacaactcccagacacggcgtggccagcct
tgctggtttagagtgccacaggttggccttattgctgtaaatgatgggattatccttcgc
aatcatatttcacgaatccttcaacgccacttcaaaggaaagccatattatgttgatctt
attgacctattcaatgaggttgagttcaagacagcttcagggcaattgttggatcttatc
actacccacgagggtgaaaaggatctaactaaatataacttgacagttcaccgccgcatc
gttcagtacaagacagcttattattcattttaccttcctgttgcatgtgcattgctgctg
gctggtgagaacttggacaactttggtgatgtaaagaacattctcgttgaaatgggaaca
tactttcaagttcaggatgattatctggattgttttggtgatcctgaattcattggcaag
atcggaactgacattgaagactacaaatgttcctggctagttgtgcaagctcttgaacgt
gctgatgagaaccaaaagagcattctgtgtgaaaattatggaaagtctgatccagcgtgt
gttgcaaaggtgaaggacttgtacaaagagcttaaactggaggaggttttccatgagtac
gagagggagagttacaacaagctgattgccgacatcgaggcccagccgagcaaggcagtt
cagactgttttgaagtccttccttcacaagatctacaagagggacaagtag
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