Sorghum bicolor (sorghum): 8068100
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Entry
8068100 CDS
T01086
Name
(RefSeq) putative pectinesterase 11
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00040
Pentose and glucuronate interconversions
sbi01100
Metabolic pathways
Module
sbi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8068100
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
8068100
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GFIT
Motif
Pfam:
Pectinesterase
Pect-lyase_RHGA_epim
Adeno_E1B_55K
Motif
Other DBs
NCBI-GeneID:
8068100
NCBI-ProteinID:
XP_002443391
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Position
8:complement(56453611..56459929)
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AA seq
426 aa
AA seq
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MARLINKAYSLALLLFCYVLSGAAEAAYNVADFGAKPDGRTDSTGAFASAWSAACRRSQA
PATVYFFLLSRAAFFTGPMLQQDDASGHPDQHPDRGRRLRLRRRPRHHQPAARGARQLRI
SSSPRPVIVTVDQAGRGHYRTIQEAINAIPARANNSTSATIARINVNPGIYTEKVVVNKP
GVSLIGRSATSTIIQWSGPWDKKHQSEFALHVLATDFVAANLTFQNPYGREGKGPAVAAK
IEGDKAAFYDCRFISFQDTLLDATGRHYYRGCYIQGATDFIFGTGKAFFERCHLHSTSHV
GGAFTAQRRCTESENTGFSFYRCELTGTGVATAILGRPWGPYARVVFAQCDMSNAVAPMG
WSNWEDEANNNFSATARDPEHKAGSSGRTTTSLERKLSPSSPMLGWMAKIGFVRRSRNLL
WHSRHI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttgatcaacaaggcttattccctagcgctgctgctcttttgctacgttttg
tcaggcgcagctgaagcggcgtacaatgtcgccgatttcggagcaaagcctgacggccgg
acggactcgaccggcgcgttcgccagtgcctggtccgccgcttgccgccggtcacaggcg
ccggcgaccgtgtacttcttcctgctcagccgtgcagccttcttcactggccccatgctc
cagcaggatgatgcttcaggtcacccggaccagcatccagaccggggacgacgactgcgt
ctccgtcgtcggccccggcaccaccaacctgctgcgcgtggagcacgtcagctgcgcata
agcagctcgcctcggcctgttatcgtcacggtagaccaggcaggcaggggtcattacaga
accatacaggaggcgatcaacgctattcctgcccgcgcaaacaactccaccagcgcgact
atcgccaggatcaacgtcaatcccgggatatacacggagaaggtcgtggtgaacaagcct
ggagtctctctgataggcaggagcgccacctcgaccatcatacaatggagtggaccctgg
gacaagaagcaccagtcggagtttgccctccatgtgctagcaactgacttcgtcgccgca
aacttaacattccagaacccgtacgggagggagggtaaaggcccggcggttgctgcaaaa
attgagggagacaaagcagctttctacgactgtcgattcatatcatttcaggataccctt
ctcgatgcaacggggcggcactattaccgtggatgctatatacaaggcgccaccgatttt
atatttggcacaggaaaggctttttttgagaggtgccacctgcactccacctcgcacgtc
ggcggagccttcacggcgcagcggcggtgcacggaatcagagaacaccggtttcagtttt
tacaggtgcgagttgaccggcaccggggtcgccacggctatcctaggccggccatggggc
ccttacgcccgggtcgtttttgcgcaatgcgacatgtctaacgcggtggcgcctatgggc
tggagcaattgggaggacgaagcgaataacaatttcagtgctacggccagggatccagaa
cacaaggccgggtcaagtgggcgcacaacaacctctctcgaaaggaagctgagcccttcc
tcaccaatgcttgggtggatggcaaagattggcttcgtccgccgcagtagaaacttattg
tggcacagtcgtcatatataa
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