Sorghum bicolor (sorghum): 8068102
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Entry
8068102 CDS
T01086
Name
(RefSeq) protein spotted leaf 11
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8068102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8068102
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8068102
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
U-box type E3
8068102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Arm_2
Neurochondrin
HEAT_2
KAP
zf-Nse
TOR1L1_N
zf-RING_UBOX
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
8068102
NCBI-ProteinID:
XP_021301517
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All DBs
Position
8:complement(56500315..56508872)
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AA seq
666 aa
AA seq
DB search
MAGEAAERVAAAVEAVGSGGWEFRNAYRRQLLALSRRIRLLGPFAEELREARRGRPAEEE
EEQERALAPLADALEEALDLLQLGRDGSRIFLVLDRNKVMKKFHESIAQLEQALCDFPYD
KLDISDEVTEQVELVHVQLKRAKERVDMPDDEFYHELLSLYNKSHDPSAELDILGRLSEK
LHLTTITDLTQESLALHEMVASGGGNDPGEHIEKMSMLLKKIKDFVQTQNPEMGPPVTTK
VMDSNGEPRPINIPDEFRCPISLELMKDPVIVATGQTYERAFIEKWIASGHHTCPNTQQR
MPNTTLTPNYVLRSLIAQWCEANGIDPPKRPTEADKPTSSCSPSERAIIDALLSKLCSAD
PEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLQTQEHAVTALLNLSIHE
DNKSSIILSGAVPGIVHVLKNGSMQARENAAATLFSLSVVDEYKVTIGGTGAIPALVVLL
SEGSPRGMKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALLDEAMAILSILS
SHPEGKAAIGAAEPVPVLVEMIGSGSPRNRENAAAVMLHLSVHNGHLARAQECGIMVPLR
ELALNGTDRGKRKAVQLLERMSRFLVMQHEDTVSQQLDEIERQFAALGPNVTEADLEQLG
EQLGYL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaggccgcggagagggtggccgccgccgtggaggcggtgggatccggtggc
tgggagttccggaacgcgtacaggcgccagctgctggcgctgtcgcggcggatccggctc
ctcggcccctttgccgaggagctccgggaggcgcgccgtgggcggcccgcggaggaggag
gaggaacaggagcgggcgctggcgccgctcgccgacgcgctggaggaggcgctcgacctg
ctccagctcggccgcgatggcagcaggatcttcctggtccttgataggaataaagtaatg
aagaagtttcatgaatcaattgctcagctggagcaagccttgtgtgattttccatacgat
aaattggatatatctgatgaagttacagagcaggttgagttagtgcatgtacagctcaaa
agagccaaagaacgggttgacatgcctgatgatgagttctaccatgaattactttcactg
tataacaagagccatgacccaagtgctgaattggatatccttggaagattgtcagaaaag
ttgcacctgacaaccatcactgatctcacacaagaatcgcttgccttgcatgagatggtg
gcatctggtggtggtaacgatcctggagaacacattgaaaaaatgtcaatgctattgaag
aagatcaaggactttgtgcaaactcagaaccctgaaatgggcccgccggtgactaccaag
gtaatggattccaacggggagccaagacctataaacattcctgatgagttccggtgtcca
atttctcttgagctgatgaaagaccctgttattgttgctactggccagacatatgagcgg
gcattcatcgagaaatggatagcttctgggcatcatacttgtccaaatactcaacagagg
atgccaaacacgacactgacaccaaactatgttcttagaagccttattgcgcagtggtgc
gaagccaacgggattgatccaccgaagcgcccaacggaggctgacaaacccacatcttca
tgctctccaagtgaacgtgctatcatcgatgctctcctctccaagttatgctctgcagat
cctgaggaacagagatcagctgctgcagagctccggctcctagcaaagcggaatgcaaat
aatcggatctgcattgccgaggctggtgccattcccttactattgagtctcctgtcgtca
tctgacctgcagactcaggaacatgctgtgactgcacttctaaacctctctatacatgag
gataacaagtctagcatcatattatctggtgctgtcccaggcatagtccatgttctgaag
aatggaagcatgcaggcacgagagaatgctgcagccacccttttcagcctatcggtggtt
gatgaatacaaagtaacaattgggggaacaggagctatccctgcccttgtagttttgcta
agtgagggcagcccacgtgggatgaaggatgcagcagctgctctattcaacttgtgtatt
taccaagggaacaagggccgtgctatacgagctggccttgtgccactcatcatggggctc
gtgacaaaccccactggtgcgctgttggatgaggctatggcgatactctcaatactctcc
agccaccctgagggtaaggctgcgatcggtgcagcagagcctgttcccgtgcttgtggag
atgattggaagtgggtcaccgaggaatagagagaatgctgcagctgtgatgttgcacctg
tctgtgcataacgggcatttagctcgggcacaggagtgcggcatcatggttccactacgg
gaactggccctgaatggcacagacaggggtaaaagaaaggcggtgcagctccttgagcga
atgagcagattccttgttatgcaacatgaggatactgtttcccaacaattggacgagatt
gaacgtcaatttgccgccttaggacctaatgttacagaggctgatcttgaacaattgggt
gaacaattgggatatctttaa
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