Sorghum bicolor (sorghum): 8068206
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Entry
8068206 CDS
T01086
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03082
ATP-dependent chromatin remodeling
sbi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8068206
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
8068206
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8068206
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8068206
03036 Chromosome and associated proteins [BR:
sbi03036
]
8068206
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8068206
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8068206
SWI/SNF complex
8068206
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
8068206
PBAF complex
8068206
SWI/SNF complex
8068206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
8068206
NCBI-ProteinID:
XP_002440558
UniProt:
A0A921Q825
C5YZL7
LinkDB
All DBs
Position
9:complement(3310201..3313103)
Genome browser
AA seq
255 aa
AA seq
DB search
MKTVSLGASRPSTVNFRMPTRDNLVPIRVDVEVDGQRYRDAFTWNPRDPDSEIISFAKRT
AKDLKLPANFVPQMLQSIQGQLAEFRSYEGQEMQIKEKIVPLKIDLRVNNTVIRDQFLWD
IGNLDSDPEEFARTLCDDLNITDPEVGPAIAVSIREQLYEIASQSVSVMREKQMSKKGRR
APEFSSNSKAVNNAVDLFKYFGSKGSVIRKRKEWYLYEPVVDVVASEEDGKEEVNNSSRP
KKRAEEEKVASLQSL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtcagcctcggcgcctccaggccctccaccgtaaacttccgcatgccgacg
agggacaacctcgtgcccatacgcgtcgacgtcgaggtggacggccagcgctacagggac
gccttcacctggaacccgcgagatcccgactcggagatcattagcttcgccaagcggacg
gccaaggacctcaagctgccggccaatttcgttccccagatgctccagtccatccagggg
caactggcggagttccgctcctacgaggggcaggagatgcaaatcaaggagaagattgtg
cctctcaagattgacctccgagtgaacaacactgtaattagagaccagttcttatgggat
atcggcaaccttgatagtgaccctgaagaatttgcaaggacgctgtgtgatgatttgaac
atcacagatcctgaagttgggcctgcaatagcagtttccatccgtgagcagctttatgag
attgctagtcagagtgtctctgttatgagggagaagcaaatgtcaaagaagggaaggcga
gcaccagaattttcttctaatagtaaagctgtgaacaatgcagtggatttgttcaagtat
tttggcagcaaaggaagtgtcatccggaaacggaaagaatggtacctgtatgagcctgtt
gtcgacgttgtagctagtgaggaagatggaaaagaggaggttaataattctagtaggcca
aagaaaagagcagaagaagagaaagttgccagtcttcagtccctttga
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integrated database retrieval system
