Sorghum bicolor (sorghum): 8068347
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Entry
8068347 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8068347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8068347
03036 Chromosome and associated proteins [BR:
sbi03036
]
8068347
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8068347
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
8068347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
8068347
NCBI-ProteinID:
XP_002451192
UniProt:
A0A921UGF7
C5Y713
LinkDB
All DBs
Position
5:complement(68459960..68469116)
Genome browser
AA seq
1097 aa
AA seq
DB search
MEVDPSPSPRSSRPLPPPPLAPTPSYFDPESSGRREEYRRYRKRLSSSNVSPLPGSSLSK
SSGPRLLYDGESIPRRPNAGLLLEDIKQEAADYSNMESLDGSILYSSAKRTSLDGGSASA
AAYSSGRQAVRQALKPVKLEDDIYVPHEGETSFTMFATLLDSANQGLMPVPDVIQQFERT
CRNASESIRSAATGKLRMVDDKLMQQKAQLLLDEAASWSLLWHLYGKGHEELSGELLVPP
ITSHQEACRFVAADLTAQLCLRIILWLEGLASEALDLEKKVRGPHVGSYLPSSGVWHRTQ
RYLKRNNNDSTIVKHVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEASELCR
SAGQAWRAATLCPFGGIDMFPSLDALHKNGKYRTLQAIELESGVGRQWRLWKWASYCASE
KIAEQDGGRYEMAVYALQCSNLKRILPICTDWESACWAMARSWLDVQVDLELSQYQTSRP
DEKQLDDDMNGAQSSVGPESWPYHVLDQQPRDLTALLQKLHSSDLVHETVSRACREQHRQ
IQMNLMSGHISHLLDLLWSWLSPAEENHSNTARPLDDPEMIRFGAHIVLVLRHLFSDEMD
DELDEKLVTVGDLIINMYVRYLFSEDQEELVGVYASQLQHDLCINLFVEMMELRLNSSLH
TMYKLFLSAVEYLPFSSDDASKACFEEIIERVLSRSRQTKPSKYDEDFSDVAHQHHLQSL
QKAMVIQWLCFTPPSSIPDFQMITGKLLIRALVHSNTLFREFSLISMRRVPELPAGPHKL
LAILAEPLKQKENLISLEDPEVSDNLLEFEDWHEYYSLDATYRSWLKIEMKNAAVSPEML
SAEEKDQAVAAAKETLDLAFLLLCRDERPWLYAVESSPFESSEVIFLELHASAMLCLPSG
ECMLPDATSCTALTSALYSTVSEDDVLHRQLKVDVQVSSRDPCCIEVALRCLAAEGDGYG
LHEANNGGLLAAVMAAGFKGELSRFQPGVSMAISRLDAWYSDGSGSVESTAAYIIRGLCR
RCCLPETILRSMQACIALSAAGDSLDNCDKLIELVGSAESGMMHLFSQQQLQEFLIFQRE
CFICTMELEEDQLPSDG
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacccctcgccttcgccgcgctcgtccaggccgctgccgcctccgccgctg
gcaccgacgccgagctacttcgacccggagtcctccggccgccgggaggagtaccgccgc
tacagaaagagattgtcttcttcaaatgtctctcctctgccgggaagctcactctccaag
tcctctggaccaagactgttatacgatggagaaagcatcccaaggcggcctaatgctggt
ttactccttgaggatataaagcaggaagccgccgattattccaacatggaaagcttggat
ggatcgatactgtacagttcagcgaaaaggacatctcttgatggtggttctgcatcagcc
gcagcatacagttcgggcaggcaagcagtgaggcaggcgctgaaacccgtcaaactggag
gacgatatctatgtgccgcatgaaggagaaacgtcttttacaatgtttgcaactctcctt
gattctgcgaaccaaggtttgatgcccgtcccagatgtaattcaacaatttgagaggaca
tgtcgaaatgcttctgagtcaatcagatctgctgccactggaaagcttcggatggtggac
gataaacttatgcagcaaaaggcacaacttttactggacgaagctgcttcctggtcactt
ctttggcacctctatggcaaaggacatgaggagctttctggagagctgttggtgccgcca
attacatcccatcaggaggcttgccgctttgttgcagcagaccttacagcgcaactgtgt
ctgcggatcatactttggcttgaaggtcttgcttctgaagctcttgatttggagaagaag
gtgagaggacctcatgttggttcatacctaccaagttctggtgtttggcaccgtacacag
aggtacctaaaaagaaataataatgattctactatagtgaagcatgtggattttgatgct
ccaactcgtgaaggagcccaacttcttcctgatgacaagaagcaagatgaattgcttcta
gaagatatatggactcttttaagagcaggaagattagaagaggcatctgagttgtgccgt
tctgctggccaggcatggagagctgccactctttgtccttttggtggcatagatatgttc
ccttccctggacgcattgcacaagaatggaaagtacagaacactacaagccattgaatta
gaaagtggtgttgggcggcagtggcgtctttggaaatgggcatcgtattgtgcttcagag
aaaattgctgagcaagatggaggccgttatgagatggctgtatacgctttacagtgcagt
aacttaaagcgtatcttgccaatctgtactgactgggagtcagcttgttgggcaatggca
agatcctggctagatgttcaagtggatctagaattatctcagtaccaaacaagtagaccg
gatgaaaagcagcttgacgatgacatgaatggagcccaaagttcagttggtccagaaagt
tggccataccatgttcttgatcagcaacctcgtgacttaactgctcttctgcagaaactc
cactcaagtgaccttgttcatgaaactgtgtctcgagcatgccgcgagcagcatcgacaa
attcagatgaatctcatgagtgggcatatatctcatcttcttgaccttctatggtcatgg
ttatcacctgctgaagagaaccatagtaatactgcaaggccccttgatgaccctgagatg
atacgcttcggggcacatattgttcttgtgctgaggcaccttttcagtgatgaaatggac
gatgagttggatgaaaaactggttactgttggtgatctcatcatcaacatgtacgtgagg
tatttgttctcagaggatcaagaggagttggttggagtatatgcctctcagcttcaacat
gacctttgcattaatttgtttgtggaaatgatggaactaaggttaaatagcagtttgcat
actatgtacaagctcttcctttctgctgtggagtatcttccattctcatctgatgatgca
tccaaggcttgttttgaagagatcattgagagagtgctttcaagatctcgacaaacaaaa
cccagtaagtatgatgaggatttctctgatgttgcacatcaacatcatctgcaatcactt
caaaaggcaatggttattcagtggctttgcttcacaccaccatcctcgattccagacttt
caaatgatcactgggaagcttctgatacgggcattggtgcatagcaatacactgttcagg
gagttttccctgatatcaatgaggagagtccctgagctaccagcagggccacacaagttg
cttgccattttagctgaaccgttaaagcaaaaagaaaatttaatttcactggaagatccg
gaggtatctgataacttactggagtttgaagattggcatgaatattactcccttgatgca
acttaccgcagttggcttaaaattgagatgaagaatgctgctgtttctcctgagatgctt
tcggcagaggaaaaggatcaagctgttgctgcagcgaaagaaacactggacttggcattc
ttgttactatgcagggatgaaagaccatggttgtatgctgtcgagagcagtccatttgaa
tcctcagaggttattttccttgagctgcatgcttctgcaatgctctgcctaccttctgga
gaatgtatgttaccagatgcaacatcatgcacagctttgacaagtgcactatattcaact
gttagtgaagatgatgtgctgcatcgccagttgaaggtggatgtccaggtgtcttctaga
gatccatgctgtattgaagttgctcttcgctgcttagcggcagaaggtgatggatatggg
cttcatgaagccaacaatggtggtcttcttgccgcagtcatggctgctggctttaaaggt
gaactcagtcgattccaacctggagtttcaatggcaatttcacggcttgatgcttggtat
tctgatgggagtggctctgtggagagcactgctgcttacataattcgagggctgtgtcgg
agatgctgccttcctgaaacaattctaagatctatgcaggcatgtattgcactctccgca
gctggcgattctctagataactgtgacaaactaattgagttagttggttcagccgagtct
ggaatgatgcatttgttcagccagcagcagttgcaggaatttttgattttccagagggaa
tgtttcatatgtacaatggagcttgaggaggatcagttaccttctgatggctaa
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integrated database retrieval system
