Sorghum bicolor (sorghum): 8068490
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Entry
8068490 CDS
T01086
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
8068490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8068490
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
RNases
8068490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
8068490
NCBI-ProteinID:
XP_021318802
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All DBs
Position
6:complement(58319145..58326018)
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AA seq
499 aa
AA seq
DB search
MAKRLAAAEKEVLVEVVRFTQKNGLRGCDGGWKDFLARNDRKFGASVSDPRKRTRDVLLA
FLQTFSKDFQKYFGKLVKRHKERSDVQQYMTDFPDEVSPEQKLVQLTAEHPEYRKHYCFP
SYQEGWKVLRIGEVSSLMSSSAMLAIDCEMVLCSDGTEAVVRVCVVDDKLKAKLDILVNP
SKAIADYRTDITGVSKNDLEGVTSSLVDVQKSLKRMLSKGNILIGHSLHRDLCVLKLDYS
QVIDTAYIFKYANLPTTASPSLNSLCKAILGYSVREEGEPHNCLKDAEAAMNLVLAKLKN
GFNDPIEIAASSVIESDVVKLLAHRIPVYLPCQELCKIFSGNPNIDDKIDSRIRGEFYST
CISFNDVDEVEKAFEELDGQKTKDSGGRLQKHVVLKRDNGDVVSFYVRKMVYGSWPKQLE
VPKNRPEPTEDSEPKKEHAEGVQQKKKRNNFVRDNEDPEPKRRPEPTLDPEPKKDHAEGV
QQKKKRSKKHTDKENASVV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggctcgctgccgccgagaaagaggtgctcgtcgaggtggtgcggttcacg
cagaagaacggcctcagaggctgtgacggcgggtggaaggatttcctggcccggaacgac
aggaagtttggcgcgtcggtgagcgaccccaggaagcgcaccagggatgtgctgctcgcc
ttcctgcaaaccttctccaaggatttccagaagtacttcggcaaattggtgaagcgtcat
aaggaaagaagtgatgttcagcagtatatgactgatttccctgatgaagtttctcccgag
cagaaacttgttcaactgacggcagagcacccggagtacagaaaacactactgcttccca
tcataccaggaggggtggaaagtattgaggataggagaagtctctagtttaatgagctca
agtgctatgttggcaattgactgtgagatggtcctttgcagtgatggcacagaggctgtg
gtcagagtatgtgttgtagatgacaagctcaaggctaagctggacatacttgtaaacccc
tcaaaagctattgctgactacagaacagacatcactggtgtatctaagaatgatttagaa
ggagtcacatcatcattagttgatgttcagaaatcgctgaagagaatgttatcgaaagga
aatattttgattggccatagcttgcatagagatttatgcgtcttaaagcttgattactct
caagttattgatacagcatacatatttaagtatgcaaatttacctactactgcatcacct
tccttaaacagtttgtgcaaggctattctggggtattctgttcgagaagaaggagaacca
cataattgcttaaaggatgcagaagctgcgatgaatctagttcttgcaaaacttaagaat
gggtttaatgaccccattgaaattgctgcaagtagtgtaattgaatctgatgtggtgaag
ttgcttgctcatagaattccagtgtacctgccttgccaagagctgtgcaaaattttctct
gggaaccccaacattgatgacaagattgattcgcgaatacgaggtgaattttattccaca
tgtatttcattcaatgacgtagatgaggtagagaaggcatttgaagaactggatggccaa
aagactaaggactcaggtgggagacttcaaaagcatgtagtgctgaagcgtgacaatgga
gatgtcgtaagcttctacgttcggaagatggtatacggttcctggcccaaacagctcgaa
gttccaaagaatagaccagagcctacggaggattcagagccaaagaaagagcatgccgag
ggagttcagcaaaaaaagaagagaaataacttcgtgagagataatgaggatccagagcca
aagaggagaccagagcctactttggatccagagccaaagaaagatcatgccgagggggtt
cagcaaaagaagaagagaagtaaaaaacacacagacaaggaaaatgcgtcggtggtgtaa
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