Sorghum bicolor (sorghum): 8068578
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Entry
8068578 CDS
T01086
Name
(RefSeq) AP3-complex subunit beta-A
KO
K12397
AP-3 complex subunit beta
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
8068578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8068578
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Others
AP-3 complex
8068578
Endosome - Golgi transport
8068578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C_2
AP3B1_C
HEAT_2
HEAT
TPR_TNPO3_IPO13_3rd
PPP2R1A-like_HEAT
DUF8005
Svf1_C
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
8068578
NCBI-ProteinID:
XP_002443772
UniProt:
C5YMD0
A0A921QHZ7
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All DBs
Position
7:1815418..1821582
Genome browser
AA seq
1101 aa
AA seq
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MFGLQASGAAASWVVGRMGTDAHLYDDPDDASIPELLDSRFDADKVDALKRLLALIAQGV
DVAHLFPQVVKNVASQSLEVKKLVYLYLLHYADKRQNEALLSINIFQKDLSDINPLVRAW
ALRTMAGIRLHVVAPLVLVAIKKCARDPSAYVRKCAAYALCKLCDLLPDESTALEEIVDI
LFNDNSPGVVGAAAVAFKSVCPSCLELVSKHFRRLCETLPDIEEWTQIVLIEILLRYVIA
RHGLVKDSLLFASDLPTETQGVTDSDAVASVPIQPDSISNGVSDTISSIMLFRHYIEQCS
GPSDREGNNLKFSSVTTNSNDDVAILLKCTSPLLWSRNSGVVLAAASVHWIMAPIGDVKR
IVGPILFTLRSSPDAAYVMLGNILVFAKTMPSLFAPFYEDFFVNASDPYQTRALKLEILT
SIATEQSIPAIFEEFQDYIKDPDRKFVADTVAAIALCAQKLPSIATACLEGLLTLVFYES
FISNSVHLDGENAVLVQAILSIKAIVKMDPVSHEKVIVRLVRCFDKIKDPAARSLIVWVF
GEYSFMGDLTTKIVPPVLKYLAWSFSAEVVETKLQILNSSAKVIMRCTEEHMEEFKRIVA
YVIELATCDLNYDVRDRARLLSRLLPCYMTHQGPSHQPQNGDIYKELADHIFNGKLQPTS
HSASNYRIYLPGSLSQVVLHAAPGYAPLPKPQSMELNHNVSEATRGKAKLSGSNNSGAES
VTSAYESSSVYDSESEGADLSDRDTFESHQDQEDNQDAPLVQIYDASIQQGQTGQNTEEN
LADLISTDLTELMSKSALESWLDEAPPEPVVQNLTQTSSARVSFTNLNFERKPKLHTLLD
SSGSNGLSALYAFSSEVSPRSRLLVCVDLYFENVTTQQLTDITIEAEEASSSVDSIDQTS
EGSSGVPTIVPLEEIHSLAPQQMAKMVLQVHFHHHLLPLKLSVLCNGKRHPAKLHPDIAY
FVRPLPMDLNTFLCKENQLRGMFEYARRCTFKDHLQKLEHEDSAEHSDKNLQVAQSVASK
ILSNANVHLVSMDMPVTFSVDDASGLCWRFSSEILSTSKPCLITILAEGHASGPLDLTVK
VNSEDTVFALNLLNRVVVIID
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacttcaggcgagcggcgcggcggcctcgtgggtggtggggcggatgggcacc
gacgcccacctctacgatgaccccgacgacgcctccatccccgagctcctcgactcccgc
ttcgatgctgacaaggtcgacgccctcaagcgcctccttgccctcatcgcccagggcgtc
gacgtcgcacacctcttcccgcaggttgtcaagaatgtggcgtcgcagtcgctcgaggtc
aagaagctcgtctacctctacctccttcactacgccgacaagcgccaaaacgaagccctt
ctttctattaacattttccagaaggatttatcagatataaacccattggtgagggcttgg
gccctgcgcactatggctggcattagactacatgttgttgctccgcttgtgttggttgct
atcaagaaatgtgccagggatccatctgcatatgtaaggaaatgtgccgcctatgcgctt
tgcaagctgtgtgacttgcttccagatgaaagcacagctttggaggagatcgtggacatc
ttgttcaacgacaattcccctggagtagtcggagctgccgctgttgcatttaagtcagtc
tgtccaagttgtttagagttagtatcaaaacatttccgaaggctatgtgagacactccca
gatatcgaggaatggactcaaattgtcctcattgagatcctcttgcgttatgtaatagcc
agacacgggttggtcaaggattctttactctttgcttcagatttaccgacggagactcag
ggcgttacagattcggatgctgttgctagcgtgcccatccaacctgattctatcagcaat
ggggtttctgatactatatcaagcatcatgctgttccggcactacatcgagcaatgctca
ggtccctctgatagagaaggcaataatttaaaattttcatctgtcaccacaaacagcaat
gatgatgttgcaattcttttgaaatgtacatcgcctcttctatggagtagaaatagtgga
gttgtacttgcagcagcaagtgtgcattggatcatggctcctattggggacgttaagaga
attgttggcccaattttgtttactctacggtcatctcctgatgcagcatatgtgatgctt
ggcaacatattagtttttgccaagacaatgccatcattgtttgccccattttatgaggac
ttctttgtaaatgcttcagatccgtaccagacgagggctttgaagcttgaaatactgacc
tctattgccacagagcaatctattccggccatttttgaagaatttcaggattacattaaa
gatccagataggaaatttgtagcagataccgttgcagctattgcattgtgtgcccagaaa
cttccctctattgccaccgcttgccttgagggacttttgacacttgtattttatgaatcg
tttattagtaactcggttcacttagatggagaaaatgctgttttggttcaagcaatcttg
tcaatcaaagcaatagtgaaaatggatccagtatcccacgaaaaggtaattgtccgcttg
gttcgttgttttgacaaaatcaaggatcctgcagcacgatccttgatcgtttgggtgttt
ggagagtatagcttcatgggtgatctcactacaaagatagttcctcctgttctcaagtat
ctcgcatggtccttctctgctgaagtggtggaaacgaagcttcaaatcctaaattcttct
gccaaggttataatgcgctgtacagaagaacacatggaagaattcaaaaggatagttgcg
tatgtcattgagttggctacatgtgacttgaattatgatgttcgtgatcgtgctcgttta
ctatcaagacttttgccatgctacatgactcaccaagggccctcacatcaacctcagaat
ggtgatatctataaagagctagccgatcatatatttaatgggaagttgcagccaacatct
cattcagcaagcaactatcgcatatatcttccaggttccctttcacaggttgttcttcat
gcagcccctggttatgcaccacttccaaagcctcaaagtatggaattaaaccataatgtc
tcggaagcaaccagaggcaaggccaaactttctggaagtaataactccggtgctgaatct
gtaacttcagcatatgagagcagctctgtttatgattcggagagtgaaggtgctgaccta
tcagacagagatacttttgaatcccatcaggatcaagaagataaccaggatgctccactg
gtacagatatatgatgctagtatacagcaaggccagacaggtcaaaatactgaggaaaat
ttggcagatctcatctctactgatttgactgagttgatgtctaagtcagccttggaatca
tggcttgatgaggctcctcctgagccagttgttcagaatttgacacagacatcatctgcc
agagtttcttttacaaacctcaactttgagcgaaaacctaaattacacacattgttagac
tcatctggcagtaatggcttaagtgctctatatgccttctcgtctgaggtttcacccaga
tcacgcttgctagtatgtgtggacttatattttgagaatgtcactacacaacagctaaca
gatataaccattgaagctgaagaggcttctagcagtgtggattctatagaccaaacatca
gaaggatcttcgggtgtccctactatcgttcctttggaagagatacattcattggctcca
caacaaatggcaaagatggttcttcaggtccattttcatcaccatctcttgcctctaaag
ctgtctgtgctttgcaatgggaaacggcatccagcaaagcttcatcctgacattgcttat
tttgttcggcccctacccatggacttaaatactttcctatgcaaggaaaaccaattgagg
ggaatgtttgagtatgctaggaggtgcaccttcaaagatcatcttcagaagctagagcac
gaggacagtgcagagcacagcgataagaaccttcaggtggcccagagtgttgcttcaaag
atactgagcaatgctaatgttcaccttgtctcaatggatatgccagtaaccttcagtgtt
gatgatgcctctggcttgtgttggagattcagcagtgaaatcctgagcacttcaaaacct
tgcctgattaccatcctcgcggaagggcatgcctcaggtccactggatcttactgtcaag
gtgaactctgaagatacggtgtttgccctgaacctcctgaacagagttgtagtgatcata
gattga
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