KEGG   Sorghum bicolor (sorghum): 8069006
Entry
8069006           CDS       T01086                                 
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8069006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8069006
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     8069006
 Prokaryotic type
  Archaeal type
    TFB
     8069006
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Cyclin_N Ribosomal_S27e Zn_ribbon_tTFIIB HTH_Tnp_ISL3
Other DBs
NCBI-GeneID: 8069006
NCBI-ProteinID: XP_002440177
UniProt: C5YUY2 A0A921U5Z1
LinkDB
Position
9:56220917..56222146
AA seq 311 aa
MADESVYCPDCHRTTEVVLDHATGDTICTECALVLEAHYIDEGSEWRNFADDGGGEDRDP
SRVGGPSDPFLSNTPLVTRIAYAGPQKTQGEGGHALPRMRVSAGAGGADHEQALVDAFHA
IADMADRLGLVGTIRDRAKDVYKRLDEAKACPTRGKKRDVFYAACLYVACRNEGKPRTYK
ELATVTAAGASAKKEIGKMTTLIKKVLGEEAGQVMDIGVVRAADYMRRFCSRLGMGNQEM
RAAQEAARRLENGLDVRRNPESIAAAISYMVVQRAGAGKTVRDVSMATGVAEATIKEAHK
DLTPHAEMLFA
NT seq 936 nt   +upstreamnt  +downstreamnt
atggctgacgagtcggtctactgcccggactgccaccgcacgaccgaggtggtgctggac
cacgccaccggcgacacaatctgcaccgagtgcgcgctcgtcctggaggcgcactacatc
gacgagggctccgagtggcgcaacttcgcggacgacggcggcggcgaggaccgcgacccc
agccgcgtcggcgggcccagcgacccgttcctctccaacacgccgctcgtcacccgaatc
gcctacgccggcccgcagaagacgcagggcgagggcggccacgcgcttccgagaatgcgg
gtcagcgccggcgccggcggcgcggaccacgagcaggcgctggtggatgcgttccacgcc
atcgcggacatggcggaccgcctcggcctcgtcggcaccatccgggaccgcgccaaggac
gtctacaagaggctggacgaggccaaggcgtgccccaccaggggcaagaagcgggacgtg
ttctacgccgcgtgcctctacgtcgcgtgccgcaacgagggcaagccgcgcacttacaag
gagctggccacggtcaccgccgccggcgcctccgccaagaaggagatcggcaagatgacc
acgctcatcaagaaggtgctcggggaggaggccgggcaggtgatggacatcggcgtcgtg
cgcgccgccgactacatgcgccgcttctgctcccggctcgggatgggcaaccaggagatg
cgcgccgcgcaggaggccgcgcggaggctcgagaacggcctcgacgtgcggcgcaacccc
gagtccatcgcggccgccatcagctacatggtcgtgcagcgcgccggcgccggcaagacc
gtccgtgacgtgtccatggccaccggcgtcgccgaggccaccatcaaggaggcgcacaag
gacctcactccgcacgcggagatgctcttcgcctag

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