Sorghum bicolor (sorghum): 8069006
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Entry
8069006 CDS
T01086
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8069006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8069006
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
8069006
Prokaryotic type
Archaeal type
TFB
8069006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
8069006
NCBI-ProteinID:
XP_002440177
UniProt:
C5YUY2
A0A921U5Z1
LinkDB
All DBs
Position
9:56220917..56222146
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AA seq
311 aa
AA seq
DB search
MADESVYCPDCHRTTEVVLDHATGDTICTECALVLEAHYIDEGSEWRNFADDGGGEDRDP
SRVGGPSDPFLSNTPLVTRIAYAGPQKTQGEGGHALPRMRVSAGAGGADHEQALVDAFHA
IADMADRLGLVGTIRDRAKDVYKRLDEAKACPTRGKKRDVFYAACLYVACRNEGKPRTYK
ELATVTAAGASAKKEIGKMTTLIKKVLGEEAGQVMDIGVVRAADYMRRFCSRLGMGNQEM
RAAQEAARRLENGLDVRRNPESIAAAISYMVVQRAGAGKTVRDVSMATGVAEATIKEAHK
DLTPHAEMLFA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgagtcggtctactgcccggactgccaccgcacgaccgaggtggtgctggac
cacgccaccggcgacacaatctgcaccgagtgcgcgctcgtcctggaggcgcactacatc
gacgagggctccgagtggcgcaacttcgcggacgacggcggcggcgaggaccgcgacccc
agccgcgtcggcgggcccagcgacccgttcctctccaacacgccgctcgtcacccgaatc
gcctacgccggcccgcagaagacgcagggcgagggcggccacgcgcttccgagaatgcgg
gtcagcgccggcgccggcggcgcggaccacgagcaggcgctggtggatgcgttccacgcc
atcgcggacatggcggaccgcctcggcctcgtcggcaccatccgggaccgcgccaaggac
gtctacaagaggctggacgaggccaaggcgtgccccaccaggggcaagaagcgggacgtg
ttctacgccgcgtgcctctacgtcgcgtgccgcaacgagggcaagccgcgcacttacaag
gagctggccacggtcaccgccgccggcgcctccgccaagaaggagatcggcaagatgacc
acgctcatcaagaaggtgctcggggaggaggccgggcaggtgatggacatcggcgtcgtg
cgcgccgccgactacatgcgccgcttctgctcccggctcgggatgggcaaccaggagatg
cgcgccgcgcaggaggccgcgcggaggctcgagaacggcctcgacgtgcggcgcaacccc
gagtccatcgcggccgccatcagctacatggtcgtgcagcgcgccggcgccggcaagacc
gtccgtgacgtgtccatggccaccggcgtcgccgaggccaccatcaaggaggcgcacaag
gacctcactccgcacgcggagatgctcttcgcctag
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