Sorghum bicolor (sorghum): 8069050
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Entry
8069050 CDS
T01086
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
8069050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8069050
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
8069050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
IMS_C
VHS
Motif
Other DBs
NCBI-GeneID:
8069050
NCBI-ProteinID:
XP_021304232
LinkDB
All DBs
Position
10:1573418..1576114
Genome browser
AA seq
710 aa
AA seq
DB search
MPRPTASSSFARGRAPPRPAAEAELGSDPSSSPAAADSSMASLIERATSTTAPAVDPVLL
RAIKSSARASDAAIQDAFRLILSLMSKPHSHVRLLAFSIADELFMRSKLFRSLLADSLDG
FLPLAVGFRRANPLPPPTASAALLRKAAVQALERWHHLFGAHYRQLRLAVEYLKESARVH
FSGLRATVDARAAREARMQEIYAAKVEQLRENLASIKAEIRSTMDEIRNGLEIIRAEYKK
FEGYVNDEDAEEEIASMSMRSIRMASLMAGEWVPETQENEAVFDALREAHRLLVSKHLVT
VQEWITVLVRVNLPDNRFRDSALKDFIDVKNEIRAVRDRCNDLGLDLDNVHRRKSDQEEE
DNEFWVEGNIEAPNRARVQSSLDVASTSKDTRKGKCVVGAVSDIGKAPVAANGTRNLDPQ
KSELFAKAPVLPWSSVFDRWGSIGDAHVNQRGLEVESHWGRVDNDATIPAAKIAELNVHC
SIYREAPVEILPCHAPLKKGGLCQRRDLKVCPFHGLIVPRDTEGNPIEQNSGSSDAEVNP
VEHLDIGGHSNEVNGNSDGDYMEETSSRTTGVNNDYGDMAGTRDLGKITAEQLARQAIKN
VRKREMDRKAQERAQRARIRQHNEDVLRDAALASTSHSAAAYEQPPGAQGRRGRRGKAKA
PTLASMLKKKVTTKDRIAERLLNTRATDATIREVSHNEDMSYREAFPNQW
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggccgacggcctcctcctccttcgccaggggccgggcgccgccgcggccagcg
gccgaagctgagctgggttccgacccctcctcatccccggcagcggcggattcctccatg
gcgtccctaatcgagcgcgccacctccaccacggcgcccgccgtcgacccggtcctcctc
cgcgccatcaaatcgtcggcccgtgcctccgatgccgccatccaggacgcgttccgcctc
atcctctccctcatgtcgaagccccactcccacgtgcggcttctcgccttcagcattgcc
gacgagctcttcatgcgctccaagctcttccgctccctccttgctgactcgctcgacggc
ttcctcccgctcgccgtcgggttccgccgagcgaacccgctcccgccgcctaccgcgtcc
gctgccttactccggaaggctgccgtccaggcgctcgagcgctggcaccatctctttggc
gcgcactaccgccagctccgcctggccgtcgagtacctcaaggagtccgcacgcgtccat
ttctctggtctacgggctactgttgatgctcgtgcagctcgtgaggctcgcatgcaagag
atctatgctgccaaggttgagcaattgcgtgaaaatcttgcatcaatcaaggcagaaatt
cggtccacgatggatgagattcgcaatgggttggagatcatccgtgctgaatataagaaa
tttgagggttatgtgaatgacgaggatgcggaggaggagattgcatctatgtcaatgcgg
agcattagaatggcgtctttgatggctggagagtgggtgcctgagactcaggagaatgag
gcagtttttgatgcactgagggaagcacaccggttgcttgtgtcaaagcatttggtcacg
gtacaggagtggataactgtgcttgtgagggtcaaccttccagacaaccgtttccgagat
tctgcattgaaggatttcattgatgttaagaatgagataagggctgtgagagatcgttgc
aatgaccttggtcttgaccttgataatgttcataggcggaagagtgaccaagaggaagag
gacaatgagttttgggtggagggaaacatagaggcaccaaatcgtgccagagtccagagc
agtttagatgttgcaagcactagcaaggacaccaggaagggaaagtgtgtggtgggtgca
gtgtctgacattggcaaggcaccagttgcagctaatggaacgagaaatcttgacccacaa
aaatcagagctctttgctaaagcccctgtgctgccatggagctctgtctttgatcggtgg
ggctcaattggggatgcacacgtaaaccagaggggactcgaggtcgagagtcattgggga
agagtagataatgatgccactatacctgcagcaaagattgcagagttgaatgttcattgc
tcaatttatagagaagccccagttgagatcctaccatgtcatgcccctctgaaaaaagga
ggactttgccagagaagggatcttaaggtatgtcctttccatggactgattgtcccacgt
gacacagaaggaaatccaattgaacagaacagtggtagttctgatgcagaagtaaatcct
gttgagcacttagacataggagggcattcaaatgaggttaacggaaacagcgatggtgat
tatatggaggaaacctcttcaagaacgacaggtgtcaataatgattatggtgacatggct
ggaactcgtgatctaggtaaaattactgcagaacagttagcaagacaagcaattaaaaat
gtccggaaaagagaaatggatcgcaaggcacaggaaagggcccaacgcgcaagaatccgt
cagcacaatgaagatgttctgcgagatgcagctcttgcttcaacttcccattctgcggca
gcctatgagcagcctccaggagcacagggtcgacgaggacgccgaggtaaggcaaaggca
ccaacgctggcatcaatgctgaaaaagaaagttaccaccaaagacagaattgcagagagg
cttctgaacactcgagccacagatgccacaataagggaggtttctcataatgaagatatg
agctacagggaagcatttccaaatcagtggtag
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