Sorghum bicolor (sorghum): 8069236
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Entry
8069236 CDS
T01086
Name
(RefSeq) protein argonaute 1D
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8069236
03036 Chromosome and associated proteins [BR:
sbi03036
]
8069236
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8069236
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8069236
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8069236
microRNA pathway
RISC loading complex
8069236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
DUF4882
Motif
Other DBs
NCBI-GeneID:
8069236
NCBI-ProteinID:
XP_021305176
LinkDB
All DBs
Position
10:60970959..60979008
Genome browser
AA seq
1048 aa
AA seq
DB search
MGSWRPKLPGLGEGSQDAEPGGGGRGPGRGFRGRGGSYHQQLPQGGRGTGYYQHGQGSML
QPRGVMMSQRWQPAGPAAGYLGQGQAYREVQAPQYYGGGRGGRGAGPSAIAPELRQAMET
SHEPDNISPETGSPDLSPRASTVEVTDQLKDLSVQDESSMCQDIVQAFPVSSNACKFPHR
PGSGSIGTRCLVKANHFFAELPDKDLHQYDVSITPEVTSRIVNRSVMEELVKLHKMSYLG
GRLPAYDGRKSLYTAGPLPFISKEFHITLLEEDDGSGVERRKKTYKVVIKFAARADLCRL
EQFLAGRQAEAPQEALQVLDIVLRELPTTRYAPFGRSFFSPDLGRRRSLGEGIECWRGFY
QSIRPTQMGLSLNIDMSATAFFEPLPVIDFVAQLLNTDIHSRPLSDAERVKIKKALRGVK
VEVTHRGNMRRKYRIAGLTSLATRELTFPVDQGGTLKSVVQYFQETYGFAIQHTYLPCLQ
VGNQQHPNYLPMEVCKIVEGQRYSKRLNQGQIRALLEETCQRPHDRERDIIQMVNHNSYH
EDPYAKEFGIKISERLASIEARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGRV
RSWICVNFARNVQESVAVGFCRELARMCQASGMDFALEPILPPIYAHPDKVERALKARFH
DAMSMLGPQRKELDLLIGILPDNNGSLYGDLKRICEIDLGLVSQCCCAKQVFKMNKQILA
NLALKINVKVGGRNTVLADAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQ
DWPEVTKYAGLVSAQSHRQELIEDLYKVVHDPQKGTICGGMIRELLISFKRSTGQKPQRI
LFYRDGVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQN
SVDRSGNILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTL
TNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDSSDSGSLASGSRGGAPSSSSTS
RSTRAATSGAVRPLPVLKDSVKNVMFYC
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttggagaccgaaactgcctgggttgggcgagggctctcaggatgctgagccc
ggtggtggtgggagaggtcctggaagaggtttccgtggccgcggtggctcctaccatcaa
caactcccacaaggtggtcgtggaactggttactaccagcatggacagggctccatgtta
caacctcgtggagtgatgatgtcgcagcggtggcagcctgctggccctgctgcaggatat
ctgggccaaggtcaagcttacagagaagtgcaggcaccacagtactatggtggtggtaga
ggtggacgtggggcaggcccgtccgccatagctcccgagctgcgccaagcaatggaaact
tcacatgaacctgataacatctcaccagaaacaggctctccagatctgtcaccaagagct
tctactgtagaagttacggatcagctgaaagatttgtctgtacaggacgaatcaagcatg
tgccaagacattgtgcaagcatttccagtgtcgagcaatgcatgtaagtttcctcatcgc
ccaggaagtggaagtattggcaccaggtgtttggtgaaggcaaatcacttctttgctgaa
ttgcctgacaaggatcttcatcagtatgatgtttcaatcaccccggaagtcacatcgcga
attgtgaaccgatctgtcatggaagagctggtgaagctgcacaagatgtcatacttggga
gggcggcttccagcctatgatggtagaaagagcctatacacggctggtccactgccattc
atttcaaaagaatttcacatcactctacttgaggaagacgatggttctggagtagagagg
cgtaagaaaacatacaaggtagtgattaaatttgctgcaagggctgatctctgtcgtctg
gagcaatttttagctggaaggcaggcagaggctcctcaagaagccttgcaagttcttgat
attgttctgcgggagctgccaacaacaagatatgcaccatttgggcgatcatttttctct
cctgacctggggaggaggcgatcccttggtgagggaatagaatgctggcgtgggttttac
cagagcattcggcctactcaaatgggcctgtcattgaatattgatatgtcggcaacagct
ttctttgagccgttacctgtgatagattttgttgcacagcttttaaacaccgacatccac
tcaaggcctctctcagatgctgaacgtgtcaagataaagaaggccttaagaggagtgaag
gtggaagttacccaccgtggtaacatgcgacggaagtatcgaatagctggtttaacatct
ctggcaactcgggagttaacttttcctgttgatcaaggcggcacattgaaatctgttgta
caatattttcaagagacctatggctttgccatccagcacacctacctgccctgtctgcaa
gtcggcaatcagcagcacccaaattaccttccaatggaggtctgcaaaatagtagaggga
cagaggtactctaagagattaaaccagggtcagataagagctcttttagaggagacatgc
cagcgcccacatgatcgggagcgtgacattattcagatggtgaatcataactcttaccat
gaggatccttatgctaaagagtttggcattaagatcagtgagcgtttggcttcaattgag
gcacggattttacctgctcctcggctcaagtataatgaaactggcagagagaaggactgc
ttgcctagagttgggcagtggaatatgatgaacaagaaaatggtaaacggtggtagagtg
aggagctggatctgtgtcaattttgctcgaaacgtgcaagagagcgttgctgttgggttc
tgccgtgaacttgctcgcatgtgccaagcctcgggaatggactttgccttggagcctatt
cttccgcctatatatgcacatcctgataaagtggagagagctctgaaagccaggttccat
gatgcaatgagcatgctcggaccacagcgcaaagaactcgatttgcttattgggatactt
cctgataacaacggttctctttatggtgatttgaagcgtatctgtgaaattgaccttgga
ttagtttcacagtgctgctgtgcaaagcaagtttttaagatgaacaaacagatactggca
aatctcgctctgaagataaatgtcaaggttggaggaaggaacacagtgctggctgatgca
gtatcaagacgcattcctttggtgactgacaggcctaccatcatatttggtgctgatgtg
acccatcctcatcctggtgaagatagcagcccttccattgctgctgttgtggcttcccaa
gattggcctgaggtgacaaagtatgcaggtttagtttctgctcaatctcataggcaagag
ttaatagaggatctgtataaggtcgtacatgatcctcagaaaggaaccatttgtggtggc
atgatcagggagctccttatatccttcaaaagatcaactggtcaaaagcctcagaggata
ctattctacagggatggtgtgagtgaagggcagttctaccaagttctactgcatgaattg
gatgcaatccgaaaggcgtgtgcatcgctggaagcaaattaccaaccacaggtgactttc
atcgtggtccagaaacggcaccacacgaggttgttcgcacacaaccacaatgatcagaat
tcagtcgacaggagtgggaacatacttcctggtactgttgtggactcgaagatctgccac
cctacagagtttgacttcttcctgtgcagccatgctggcatcaagggcacgagccgtcct
gctcactaccatgtcttgtgggatgaaaacaacttcacagctgatgcattgcagaccctt
accaataacctttgctacacttacgcgaggtgcacacgttctgtatccattgtcccacca
gcatactacgctcatctagctgcattccgcgcccggttctacatggagccggacagctca
gacagtggatcactggcgagtggctctcgcggaggagcgccgtccagctcttctacatcc
cgcagtacccgtgccgccaccagtggagccgttaggccccttcctgtgctcaaggacagt
gtcaagaacgtcatgttctactgctga
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integrated database retrieval system
