Sorghum bicolor (sorghum): 8069359
Help
Entry
8069359 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8069359
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8069359
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8069359
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8069359
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8069359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
8069359
NCBI-ProteinID:
XP_021305159
LinkDB
All DBs
Position
10:complement(55635884..55642556)
Genome browser
AA seq
976 aa
AA seq
DB search
MLGGGAGGGGAGLGLDFSAVIQAAVVGLVLFSAAVVAVRRAASRYFVVDAAGFAASYDDH
HHDPMGNPQEQGAAAADLMGPCAACGGVASKKCSRCKRVRYCSQECQTNHWQSDHKFKCK
QMKSLDPADKLSSGGEANNKKTSGFGRISLVPACKKISKGQVLFPYDEFLKLYNWKEFDF
VPCGLMNCGNSCFANVVLQCLSCTRPLVSYLLGKDHSRECSMRHEDWCFLCELQCHIHRA
SGSLHPFAPTNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEYGGEKAVDLST
QETTIIQHIFGGRLQSQVQCTACGMVSNRYDNMMDLTVEIQGDAESLEKCLDQFTAIEWL
DGDNKYKCDGCNDYVKARKHLSVHQAPNILTITLKRFQSGRFGKLNKRVTFPMELDLTPY
TSCTDGSDLYDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVHAQ
GAYMLLYSRRTARPKPLVTVDESVKQQQQCKLLPSNGQSHMILADATLNCESSLKTTEDP
LRQDCESNNGSLHEMDIKDQESDLDLCTSIEDDKFISNENLHIPGSHVLEDTRAPDSFAE
QCEVQLGPPLEGGRITMSSVQFGSSTCKASSEHSFAEQCEVPAPCIDSVDYMDLDTEAAA
EVVLDDSVGRPNNNSEIPTANGMSGEPKPSFSSGFFDKPSRKRSSFAEEDSAGSPRKLNG
YCNGHLSSLEQGILANSGSEKCNGDTLATSSNGNCYAVNGDAQSRNDSLDADKGDVPFVS
HGFEPRPYKVLSDSNNNCSRTSNGKPKAYQGDMSFLPRGFLGRSSSRGISVKADDGLPFS
NGASSSFGNGKSKSSNHSSSIGGLSPGFLTRHRRESIALGTSSDISMDTKSNGAAVMPEG
AEEMVSDCTTNGSSFQIRASDHLDENGLAILHTKSNSCGQENDSNGTPSMNHDGSEHGLR
RRITSKFFEQDGIDAQ
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtggcggcgccggaggcggtggcgcgggcctgggactggacttctcggcggtg
attcaggcggccgtcgtcggcctcgtgctcttctccgcggccgtcgtcgccgtgcgccgc
gccgcctcgcgctacttcgtcgtcgacgccgcggggttcgccgcctcctacgacgatcac
caccacgacccgatgggtaacccgcaggagcagggggccgccgcggcggacctcatgggg
ccctgcgccgcgtgtggtggcgtcgcctccaagaagtgctctcggtgcaagcgcgtgcgg
tactgttcccaagaatgccagacaaatcattggcaaagtgatcacaaattcaagtgcaaa
caaatgaaatcattggatcctgctgacaagttatccagtggaggtgaggccaacaataaa
aaaacatcaggtttcggtcgcatctcattggtgcctgcctgtaaaaagataagcaagggt
caggttctctttccttatgatgaatttttaaagttgtacaactggaaggaatttgatttc
gtaccttgtgggcttatgaactgtggcaacagttgctttgctaacgtggttttacaatgt
ctctcatgcacgagaccgcttgtgtcctatctattaggaaaggaccatagcagggaatgt
tctatgagacatgaagattggtgttttttatgtgagctgcaatgtcatattcacagagct
agtgggagtttgcacccatttgctcctacaaacattctttctcatctgccaaatattggt
ggcaatcttggctttggtaggcaagaggatgctcatgaattcatgaggtttgcaattgat
aagatgcaatctgcttgccttgatgaatatggaggtgagaaggctgtagatcttagcacc
caagagacaaccattattcagcacatatttggtgggcggctgcagtcacaggttcaatgc
actgcatgtggaatggtctcaaaccgctatgataatatgatggatttgactgttgaaatt
caaggtgatgccgaatcattggaaaaatgcttggatcagttcactgctatcgagtggctt
gatggggataataagtacaaatgtgatggatgcaacgactatgtgaaagcacggaagcat
ctttcagttcatcaagctccaaatatacttactatcactctcaaaagattccagagtggt
agatttgggaaactgaataagagagttacattccctatggagttagatctgacaccatac
acgagttgcactgatggaagtgacctgtatgatctctatgctgtggttgttcatctggat
atgctgaatgcgtcattttttgggcactatatatgctatatcaaaggttatcaaggaagg
tggtataaaattgatgactgcaaggttatggttgttgatgaggaggaagtacatgctcaa
ggcgcttatatgcttttatatagcaggagaacagctcgtcccaagccacttgttacagtt
gatgagtctgtgaaacagcaacaacagtgcaaattgctcccttcaaatggacaaagccac
atgatactagcagatgcaacattaaactgtgaatcatctttgaagactacagaagatccg
ttacgacaggattgtgaatccaataatggatctttgcatgaaatggatattaaggaccag
gagtcagacttggatctatgtacaagcattgaagatgacaaattcattagcaatgaaaat
ctacatataccaggttcacatgttcttgaagatactagagctccagattcctttgcagag
caatgcgaggtgcaacttggccctcctttagaaggtggtcgtattacgatgagctctgtg
cagtttggcagctccacatgcaaagcatcttcagaacattcctttgcagagcaatgcgag
gtgcctgccccatgtattgattcagttgactatatggatcttgataccgaagctgctgcc
gaagttgtcttagatgattcagttgggaggccgaataataactcagaaattccaactgca
aatgggatgtcaggagaaccgaaaccatcattttcctctggtttttttgataagccctca
agaaaaaggtcttcctttgcagaagaggatagtgctggttctcctcgaaagttaaatggc
tattgcaatggacatctcagcagtctagagcaaggaattcttgccaactctggaagtgaa
aagtgcaatggagatacactcgcgacatccagtaatggcaattgctatgcagttaatggt
gatgcacaatctcgcaatgattccttggatgcagacaagggagatgtgccttttgtttct
catggctttgagccaagaccttacaaagtactatcagacagcaacaacaattgcagtagg
acaagcaatgggaaacctaaagcttaccaaggggacatgtcatttttacctcggggcttc
cttggaaggtctagttccagaggaatttcagtcaaagcagatgatggcttgccatttagt
aatggtgcatcatcatcctttgggaatggaaaaagtaagtcaagtaaccactcatcttct
ataggtggcttgtctcctggtttccttacaaggcatcgcagggaatccattgccctaggc
acaagctctgacatttcaatggatacaaaatctaatggtgctgcagtaatgccagagggt
gcagaggaaatggtttcagattgtacgacaaatggatcttcgttccaaataagagcgtcc
gaccaccttgatgaaaatggccttgcaattttgcacacaaaaagtaacagctgtgggcaa
gaaaatgacagtaatggaacccccagcatgaatcatgatggttctgaacatggactgcgc
cgaagaataacctcaaaattttttgagcaggatggtattgatgcccaataa
DBGET
integrated database retrieval system
