Sorghum bicolor (sorghum): 8069499
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Entry
8069499 CDS
T01086
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8069499
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8069499
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8069499
03036 Chromosome and associated proteins [BR:
sbi03036
]
8069499
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
8069499
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
8069499
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
8069499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
EF-hand_13
IGFBP
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
8069499
NCBI-ProteinID:
XP_002439288
UniProt:
C5Z042
LinkDB
All DBs
Position
9:4283205..4288413
Genome browser
AA seq
490 aa
AA seq
DB search
MSTASGDGADAGGDGASSAAAGASAPAGRRIPPASSMPWVRNLRRFVGTGAGLGSEALME
LETKRILLEIFKERQRKSAEAGSIPSFYKKKPEEGSISSRVQRLAKYRFLKKQSELLLNA
DDLDAMWVCLRENCVIDDATGAEKMNYEDFCHIATVCTEQIGQKCKRFFSPSNFMKFEKD
DSGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDM
PTAFVQMYCRIAARKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAE
NWFSLTSAQRICDMFLALDKDTNGTLSKQELKEYADGTLTEIFIERVFDEHVRRSKVGGG
NSREMDFESFLDFVLALENKDTPEGLTYLFRCLDLNGRGFLTTADIHTLFRDVHQKWIEG
GNYELCIEDVRDEIWDMVKPADPLRISLPDLLSCKQGGTIASMLIDVRGFWAHDNRENLL
QEEEEQVEEA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcctccggcgacggcgcggacgccggcggcgacggggcctcctctgcagcg
gccggcgcgtcggcgcccgcggggaggcggatcccgcccgcctcgtccatgccgtgggtc
cgcaacctccgccgcttcgtcggcacgggcgccggcctcggatccgaggccctcatggaa
ctggagactaaaaggatattgcttgagattttcaaggagcggcagcggaagagtgccgaa
gctggttccatcccaagtttttacaagaagaaacctgaagaaggatccattagctctaga
gttcagaggttggccaagtacaggtttctaaagaaacaatcagagcttctgctgaatgct
gatgatcttgatgccatgtgggtttgtcttagagaaaattgtgttattgatgatgctact
ggtgctgaaaagatgaattatgaagatttctgccatattgccacagtctgcacggagcag
attggtcagaaatgcaaacgtttcttcagcccttcaaactttatgaagtttgagaaggat
gattctgggaggattgctatcctaccattttatctttatgtcatgcgaacagtttctctt
actcaagcaagaattgatatgagtgagcttgatgaggattctgatggtttccttcagcct
catgaaatggaagcatatattagaggactcatccccaatttggcacaattgcgtgacatg
cccactgcatttgtccagatgtactgccgtatagctgcacgcaagttctttttcttctgt
gatccacacagacgggggaaagcatgtataaagaaagtgttgctgagcaattgtcttcaa
gagctaatggaactacatcaggagagcgaggaagaggtaaccgataccgagcaggcagaa
aattggttttccttaacttcagctcagcgcatatgtgacatgtttcttgcactagataag
gatactaatggtacactgagcaaacaagagctcaaggaatatgcagatggcacattgact
gagattttcattgaaagagtttttgatgagcatgtccgccggagcaaagttggaggtgga
aacagtcgtgagatggactttgaaagctttcttgattttgttttggctctagaaaacaaa
gatacccctgaaggcctgacatatttatttagatgccttgatcttaatggaagagggttc
cttacaactgcagatatccatactttatttagagacgtacaccagaaatggattgagggc
gggaactatgagctttgcatcgaagatgtgagggatgaaatctgggacatggtgaagccc
gcagatcctctcaggatctcgctgccagatcttctttcttgcaagcaaggcgggactatc
gccagcatgcttatagatgtgcgtggcttctgggcccacgacaacagggagaaccttctc
caggaagaggaagagcaagtggaagaggcatga
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