KEGG   Sorghum bicolor (sorghum): 8069545
Entry
8069545           CDS       T01086                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03013  Nucleocytoplasmic transport
sbi03015  mRNA surveillance pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8069545
  09122 Translation
   03013 Nucleocytoplasmic transport
    8069545
   03015 mRNA surveillance pathway
    8069545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8069545
   03041 Spliceosome [BR:sbi03041]
    8069545
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     8069545
Spliceosome [BR:sbi03041]
 Complex C
  Other components
   EJC/TREX
    8069545
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 8069545
NCBI-ProteinID: XP_002457845
LinkDB
Position
3:complement(21952831..21959663)
AA seq 192 aa
MAAANAGDVDVVDFDSDDDDLMDDDALEAYPASAPRLRSTIAASGDSSAAARKTKGRGFR
EEPSSSRPLAGRSDFDSLGSDYGPGPLRSIEGWIILVTGIHEEAQEDDLHNAFREFGQVK
NLHLNLDRRTGFVKGYALVEYESFDEAQAAIKAMDGTELVTQIINVDWAFSSGPVKRRNV
RWRSRSPVRRRY
NT seq 579 nt   +upstreamnt  +downstreamnt
atggctgcggcgaacgcaggggacgtggatgtggtcgatttcgactccgacgacgacgac
ctcatggacgacgacgccctcgaggcctacccggcctccgcccctcgcctccgctccacc
atcgcggccagcggagattcctccgctgccgcgcgcaagaccaaaggccgcggattccgc
gaggagccttcctcctcgcggcccttagccggccgctccgacttcgactccctcggctcc
gactatggccctggacccctcagatctattgaggggtggattattttggtaactggcatc
catgaagaagcacaggaggatgatctccataatgctttccgggaatttgggcaggtcaag
aaccttcatttgaatttagatcgtcgtactgggtttgtcaaaggatatgctttggttgaa
tatgagagctttgatgaagcacaggctgcaattaaagcaatggatggaactgagcttgtt
acacagataataaatgttgactgggcatttagtagtggcccagttaagcgaagaaatgtt
cgctggagatcaaggagccctgtcaggagaagatactga

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