Entry |
|
Name |
(RefSeq) protein PAF1 homolog
|
KO |
K15174 | RNA polymerase II-associated factor 1 |
|
Organism |
sbi Sorghum bicolor (sorghum)
|
Brite |
KEGG Orthology (KO) [BR:sbi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sbi03021]
8069621
Transcription machinery [BR:sbi03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
8069621
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
7:complement(4642492..4649119)
|
AA seq |
640 aa
MASYRPYAPPQQHPPPPPPQGGYPPQMNPYAPPPQQAPYNRMPAPPYHAGPPPPPPPGPP
PPHQPQFNFGPGPPQQPPPPPQMYYQPPPPPYGGTSNPPPPPPSVPPPPPSPPPAAPPPP
PPPPAQPPSVQAPLPPKEQPPKATLPRVETEEERRARKKREFEKQRVEDRKQQQMMRQTQ
AAILQKTQQRAAQQQPQSRHHHHQPPSGSRAPATGSRAVVTGSRAVATGSRPASAPNAER
FENRLKKPTTFLCKHKFRNELPDPSAQLKWLPLNKDKDRYTKYRITSLEKNYIPKMIVPD
DLGIPLDLLDMSVYNPPDVQPRMAPEDEELLRDDEVLTPIKQEGIRKRERPTDQGVSWLV
KTQYISPLSTDAAKMSLTEKQAKERRESREGRNAFLDNLNDREKQIKAIEESFKAAKSRP
VHQTKRGMQAEWVMPLLPDFDRYEEPFVMVNFDGDPTADSEQYNKLERSVRDECESRAVM
KSFSVSGSDPTKQEKFLAYMAPAPHELTRDLDDDDDIQYSWLREYHWDVRGDDKDDPTTY
LVTFDKEEGAKYLPLPTKLVLQKKKAKEGRSGDEIEHFPVPSRITVSKTAHGGTMERGES
SGLHVNSKPRRSHVDDDLDEHPKRSRVEDIDQYSGEEYSE |
NT seq |
1923 nt +upstreamnt +downstreamnt
atggcgtcgtacaggccatacgcgccgccgcagcagcatccgccgccaccgccaccgcag
ggcggctacccgccgcagatgaatccgtacgcgccgccgccgcagcaggcgccgtacaac
aggatgccggcgccgccttaccacgcggggcccccgccgccgccgccacccggcccgccg
ccacctcaccaaccgcagttcaatttcggtcccgggcctccgcagcagcccccgcccccg
ccgcagatgtactaccagccgccgccgccgccctacggcgggaccagcaacccgcctcct
cctcccccttcggtgccacccccgcctccgtccccaccccctgcggccccgcccccgccc
cctccgcctccggcccagccaccgtctgtccaagccccgctgcccccaaaggagcagccg
cctaaggcgacgctgccaagagtggagacggaggaggagcgtcgcgcgcggaagaagcgc
gagtttgagaagcagcgggtggaggaccgcaagcagcagcagatgatgcgccagacgcag
gccgccattctgcagaagacgcagcagcgcgctgctcagcagcagccacagagccgccac
caccaccaccagcctccgagtggctctcgggcaccggcaactggctctcgggcagtggta
actgggtctcgggcagtggcaactgggtctcgcccagcatcagcgcctaatgctgagagg
tttgagaaccggctaaaaaagccaacaactttcctctgcaagcacaaatttaggaatgaa
ctccctgatccaagtgctcagctgaaatggctgcccctgaataaggataaggaccgatat
accaaatacaggataacttcattggagaaaaactacattcctaaaatgattgtccctgat
gatcttgggatacctcttgacctacttgacatgagtgtatacaaccccccagatgttcag
ccgcgcatggctcctgaagatgaagagctattgcgtgatgatgaggtcctcacccctatt
aaacaagaaggtataaggaaaagggagaggcccactgaccaaggtgtttcttggctggtc
aaaacacaatacatatctccactaagtactgatgcagccaaaatgtcccttactgagaag
caagcaaaggaaaggcgggaatcaagggagggtcgcaatgctttcctagacaatcttaat
gatagagagaaacagatcaaagccattgaagaatccttcaaagcagccaagtcaaggcct
gttcaccagactaaacgtgggatgcaagctgagtgggttatgcctttgctacctgatttt
gataggtacgaggagccatttgttatggtgaactttgatggcgatccaactgctgattct
gagcagtacaacaaacttgagagatctgtacgtgatgaatgtgaatcccgggctgtgatg
aaaagttttagtgtcagtggttcagaccctacaaaacaagagaagtttttggcatacatg
gccccagcacctcatgagcttaccagagacttggatgatgacgatgatatccagtattcc
tggctaagagaatatcactgggatgtaagaggagatgataaagatgatcctacaacatac
cttgtcacatttgataaggaggagggtgcaaaatatttgcctcttcctactaagctagtt
ttgcagaagaagaaagcaaaagaggggaggtctggggatgaaattgagcattttccagtg
ccttcccgtattactgtgagtaaaacagctcatggtggtaccatggagcgcggagaatct
tccggcttgcatgtgaattcaaagccacgaagatctcatgttgatgatgatcttgatgag
catccaaagcgttctcgagtagaggatattgaccaatatagtggcgaagaatattctgag
tga |