Sorghum bicolor (sorghum): 8070144
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Entry
8070144 CDS
T01086
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8070144
Spliceosome [BR:
sbi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
8070144
Other components
Complex C specific factors
8070144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
8070144
NCBI-ProteinID:
XP_002442512
LinkDB
All DBs
Position
8:59836718..59841983
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AA seq
843 aa
AA seq
DB search
MAEEAEGMDRFDMEGDFEGGQFGRDGEFYYRSRRERAPQTRDDAIYGVFAEGDSDYDSEE
DEGSRRRRRKRRKDGGGGEADLTKPVQFVSTGKFMPTQEPEPEERPGLGRSAAAADDKAE
EAEEEEQDDEGDTEMLPAMFGKIRDGARARREEKEREREAAARWRQVAGLGAGEPAAAPG
SLESNSKVAKMMLMMGYKKGMGLGKNQQGITAPVESILRPKNAGLGSVEGFKEPKTLLPK
ENVPAPPPPPASAKKEKRWSKKAATKKAPILTKNELLAMRAEQEHEEQPAVVQKVIDMRG
PQARVLTDLKGLNEEQEMEANDVPMPELQYNVRLLVDEARADIVRLDAQLRREQEKVASL
VREKEKVARQEASQKRQLLVMERIAETLEKVREDDTAGMLTLDGLIQTFHGLKVQFEEEF
KMCSIAWIACRYAHPLLIRIFQGWQPLQDPKFGLEVMKKWKDLLQGDQPYDFSDSAASMT
PYVQLVSEVILPAVRISGTNSWEAREPEPMLHFLELWDNKKLLPPVLLQSILEHVIMPKL
SAAVDSWDPRRESVPIHVWVHPWLPMLRERIETLCHSIRYKLSTVLHVWQAHDASAYAVL
SPWKDVFDSASWEDLIVRYIIPKLRLALQDFQINPANQKLDQFNWVMLWASAIPVHLMVH
MLEVYFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTAGLDMM
NQAAEGLEVVQPGARENVGYLRATEKRQFDAAQQAYHAAPGAAMADLSFKESIQAYAMEQ
GLLFMPRVGKFYNGMPVYEFGSVSICIDSVKRLLYAQLQDGVERWSAVTLTQLMDMNRMG
RPH
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcggaggggatggaccggttcgacatggagggggacttcgagggcggg
cagttcggccgcgacggggagttctactaccggagccggcgggagcgggcgccgcagacc
cgggacgacgccatctacggggtgttcgcggagggcgactcggactacgactcggaggag
gatgaagggtcccgccgccgccgccggaagcgccgcaaggacggcggcggcggggaggcc
gatctcaccaagcccgtccagttcgtctccaccggcaagttcatgcccacccaggagccc
gagcctgaggagaggccggggctcgggcgctctgccgctgccgctgatgataaggcggag
gaagcggaggaggaggagcaggacgatgagggggacaccgagatgctgccggcgatgttc
ggcaagatcagggacggcgcgcgcgcgaggcgggaggagaaggagcgggagcgcgaggcg
gcggcgcgctggcgacaggtggcggggctcggggcgggggagccggctgcggctcctggg
agcctggagtcaaactccaaggtggccaagatgatgttgatgatggggtacaagaaaggc
atgggccttggcaagaatcagcaggggatcactgcgccggtggagtccattctgcgaccc
aagaatgctggcctggggagcgtcgaggggttcaaggagcccaagaccttgttgcctaag
gagaacgtaccagccccgccgccgccaccagcatctgcgaagaaggagaagcgttggtcc
aagaaggctgccacaaagaaggctccaatcttgacaaagaatgagctcctggccatgcgt
gctgagcaggaacacgaggagcagcctgctgttgtccagaaggtgattgacatgcgaggg
ccgcaggcgcgggtgctgacagacttgaaggggctcaatgaagaacaagagatggaggcg
aatgatgtgcccatgccagagctgcagtacaatgtgcgcctgcttgttgatgaggctagg
gctgatattgtgaggttggatgcgcagctgcggcgggagcaggagaaggtggctagcttg
gtgcgggagaaggaaaaagtggctaggcaagaggcatcgcagaaacgtcagctgctggtg
atggaaagaattgcagagacactggagaaggtcagggaggatgatacagctggcatgctc
actctggatggtttgattcagacattccacgggttgaaggtgcagtttgaggaggagttc
aagatgtgtagcattgcatggattgcttgccgatatgctcatccgctgctaatccgcatc
ttccaagggtggcagcccctgcaggatccaaagtttgggttagaagtcatgaaaaaatgg
aaggacctgctgcagggtgaccaaccatatgacttctcagatagtgctgcatcaatgacg
ccatatgtgcagcttgttagtgaagtcatcctaccagctgtgagaatatcaggaaccaat
tcgtgggaggctagggaaccagaaccaatgctccactttcttgagttatgggataataag
aagttgctgcctcctgttttgcttcaatcaatactagagcatgtaatcatgccaaagctc
tcagctgccgtggattcatgggatcctcgcagggaaagtgtaccaatccatgtctgggtg
catccatggctgccaatgctaagggaaaggatagagaccttgtgtcattctattcgatac
aagttgagcactgtcctccatgtatggcaagcacatgatgcttcagcatatgcagtgttg
tctccgtggaaagacgtgtttgattcagcaagctgggaagacctgattgtgcggtatatc
attcctaaactgagattggcactgcaagactttcagatcaacccagcaaaccagaagctt
gatcagttcaactgggtgatgttgtgggcatctgcaatcccagtacacctcatggtccat
atgttggaagtttatttcttcagcaagtggcagcaggtcctgtaccattggttgtgctca
ccaaatcctgatttcaacgagataatgaactggtataagggatggaagggtcttttccca
ccagagttacttgccaatgagcgcatacggatgctgctaactgctggtcttgacatgatg
aaccaagctgctgaaggacttgaggtggtgcagcctggggctagggagaatgtgggttac
ttgagggcaactgagaagcggcagtttgatgcagcacagcaagcttaccatgctgcgcca
ggagctgccatggcagatttgagcttcaaggagtctatacaggcatatgcaatggagcaa
ggtttgttatttatgcctagagttggcaagttctacaatggcatgccagtgtatgagttt
ggctccgttagtatttgcatagactctgtgaagcgactactgtatgcacaacttcaagat
ggagttgagagatggagtgctgtaactcttacacaattgatggacatgaaccgaatggga
agaccacactag
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