Sorghum bicolor (sorghum): 8070341
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Entry
8070341 CDS
T01086
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00061
Fatty acid biosynthesis
sbi00071
Fatty acid degradation
sbi01100
Metabolic pathways
sbi01212
Fatty acid metabolism
sbi04146
Peroxisome
Module
sbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8070341
00071 Fatty acid degradation
8070341
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8070341
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbi01004
]
8070341
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8070341
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8070341
Lipid biosynthesis proteins [BR:
sbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8070341
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
8070341
Exosomal proteins of breast cancer cells
8070341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Motif
Other DBs
NCBI-GeneID:
8070341
NCBI-ProteinID:
XP_002441705
UniProt:
A0A921QCH2
C5YQ78
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All DBs
Position
8:892356..901804
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AA seq
682 aa
AA seq
DB search
MEDDAAHLQRPTPLLAVNPTAAEYVHAQGYSVVLPEKLQTGRWNVYRSAHSPLRLISRYP
DTPDIGTLHDNFTYAVETFTDCRYLGTRIRTDGTIGDYKWMTYGEASTSRTAVGSGLIYH
GVREGACIGLYFINRPEWVIVDHACSAYSYVSVPLYDTLGPDAVQFIVNHAAVEVIFCVP
QTLSILLSFIAQMPCVRLIVVVGGDDANMPSTPVTTGVEIITYSKLLIQGKISPQHFRPP
KPEDVATICYTSGTTGTPKGVVLSHENLIANVAGSSLNIKFYPSDVYISYLPLAHIYERV
NQIAALHCGVAIGFYQGDNLKLMDDLAALRPTIFASVPRLYNRIYTAITNAVKESGGLKE
KLFHTAYNVKRQAILNGKNPSPVWDKLVFNKIKARLGGRVRLMSSGASPLSADVMEFLRI
CFGGEVLEGYGMTETSCIISAMDVGDRSIGHVGSPIASCEVKLVDVPEMNYTSEDQPYPR
GEICVRGPIVFHGYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQG
EYIAPEKIENVYAKCKFIAQCFIYGDSLNSFLVGIVAVEPEVLKAWAASEGIQCEDLRQL
CADPRARAAVLADMDSVGKEAQLRGFEFAKAVRLVAEPFTVENGLLTPTFKVKRPQAKTY
FAKEISDMYAELREAEAPRSKL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgccgcgcacctccagcgcccgacgccgctcctcgccgtcaaccccacc
gccgccgagtacgtccacgcacagggctacagtgtcgttctccctgagaaattgcaaact
ggcaggtggaacgtgtaccggtctgcgcattcacctctgaggttgataagtagatatcct
gacaccccagacattggaacactgcatgataatttcacgtacgcagttgagacatttaca
gactgtagatacctgggaacaagaatcagaacagatggaacaattggagactacaaatgg
atgacatacggagaagctagcacgagcaggactgcagtaggttctggtcttatctatcat
ggagttcgtgaaggtgcatgcattggtctgtattttataaacagacctgagtgggttata
gttgaccatgcttgttctgcatattcatatgtatctgtgccactttatgacactctcggc
ccagatgctgttcaattcattgtgaaccacgcagcggtggaagttatattctgtgtgcct
caaactctaagcattctgttaagttttatagctcaaatgccatgtgttcggcttatagtg
gtagttggtggagacgatgcaaatatgccatcaacgccagtaactactggagtggaaatc
ataacttactccaagctgctcatccagggaaagatcagtcctcaacattttcgtccgcca
aagcctgaagatgttgccactatctgttacactagtggcactactggcacgccaaaggga
gttgttctttctcatgagaacttaattgcaaatgtagcaggatcaagcctgaacattaag
ttttacccctccgatgtgtatatctcatatcttcctttggctcacatctacgagagggtt
aaccagattgctgcgctgcactgtggcgttgccattggattctaccaaggggataatttg
aagctcatggatgatctggctgctttgagaccgacaatattcgcaagtgtcccccggtta
tataacagaatttataccgcaattacaaatgctgtgaaggagtctggtgggctgaaagaa
aaattgtttcatactgcatacaatgtcaagagacaagcaatccttaatgggaaaaatcca
tccccagtgtgggataagttggtatttaacaaaataaaagctaggcttggtggacgagtg
agacttatgagttcaggtgcctctccactgtcagcagatgtcatggaattcctgaggata
tgctttggtggtgaagttcttgaaggctatggaatgacggagacatcctgtattatatct
gcaatggatgttggtgacagatcaattggtcatgttggatctccgattgcatcttgtgag
gtgaaacttgtggatgtcccagaaatgaattatacgtccgaagatcaaccttatcctcgt
ggagaaatttgtgttagaggacctatagtattccatggttactataaagatgaagttcaa
acaaaagaagtcattgatgaagatggttggttgcacactggagacataggtctgtggcta
cctggagggcgtttaaagattattgataggaaaaagaacattttcaagttagctcaagga
gaatacatagctccagagaagattgaaaatgtttatgccaaatgcaagttcattgcccaa
tgttttatatatggtgacagtttaaactctttcttagttggtattgttgcagttgaacca
gaggttttgaaggcttgggctgcatctgaaggaatccagtgtgaagacttgagacagctt
tgtgcagaccctagagcaagagctgctgtcctggctgatatggattctgttgggaaggaa
gcgcagctaagaggttttgagtttgctaaagctgttcggcttgttgctgagccattcaca
gtggagaatggtctcctcaccccaacattcaaggtcaaaagaccgcaagccaagacgtac
tttgcaaaggaaatttcagatatgtatgcagagttgcgggaggcagaggcacccaggtcg
aagttgtga
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