Sorghum bicolor (sorghum): 8070405
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Entry
8070405 CDS
T01086
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbi04990
]
8070405
Domain-containing proteins not elsewhere classified [BR:
sbi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
8070405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
NBCH_WD40
PD40
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_ELP1_1st
DUF5711
Ge1_WD40
RAB3GAP2_N
DUF5018
Motif
Other DBs
NCBI-GeneID:
8070405
NCBI-ProteinID:
XP_002457449
UniProt:
A0A921RBB7
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Position
3:complement(7755413..7761081)
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AA seq
610 aa
AA seq
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MAQLVETYACSPATERGRGILLAGDPKTDTIAYCTGRSVIIRRLDAPLDAWAYQDHAYPT
TVARFSPNGEWVASADASGCVRVWGRYGDRALKAEFRPLSGRVDDLRWSPDGLRIVVSGD
GKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFRIVTCGEDFLANFYEGPPFKF
KHSIRDHSNFVNCIRYAPDGSKFITVSSDKKGLIYDGKTGEKIGELSTEGGHTGSIYAVS
WSSDSKQVLTVSADKSAKVWDIMEDASGKLNRTLACPGIGGVDDMLVGCLWQNDHLVTVS
LGGTFNVFSASNPDQEPVTFAGHLKTVSSLVFFTKSSPRTILSTSYDGVIMRWILGVGFG
GRLTRKNNTQIKCFAAVEEELVTSGYDNKVFRIPLNGDQCGDAESVDVGGQPNALNLALQ
KPEFALITTDSGIVLLHNSKVISTTKVNYTITSSSVSPDGTEAVVGAQDGKLRIYSISGD
TLTEEALLEKHRGAITSIHYSPDVSMFASADSNREAVVWDRASREIKLKNMLYHTARINS
LAWSPDSRLVATGSLDTCAIVYEIDKPATSRITIKGAHLGGVHGLTFLENDTLVTAGEDA
CIRVWKVVQQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctggtggagacgtacgcgtgctcgccggcgacggagcgcggccgtgggatc
ctcctggccggggaccccaagacggacacgatcgcctactgcacgggccgcagcgtcatc
atccgccgcctcgatgcgcccctcgacgcttgggcctaccaggaccacgcctaccccacc
accgtcgcccgcttctcccccaacggcgagtgggtcgcctccgccgacgcctccggctgc
gtccgcgtctggggccgctacggcgaccgcgcgctcaaggccgagttccgacccctctcg
ggacgcgtcgacgacctccgctggtcccccgacggcctgcgcatcgtcgtctccggggac
ggcaagggcaagtccttcgtccgcgcattcgtgtgggactctggcagcacagttggtgag
tttgatgggcactcaaagagggttctgagctgtgacttcaagcctacacgtccatttcgc
attgtgacatgtggtgaagattttctggctaacttttatgaaggaccaccattcaaattc
aagcattccataagggatcactcaaattttgttaattgtatccggtatgctcctgatggt
agtaagtttatcactgtgagttctgataagaagggtttgatatatgatggcaaaactgga
gagaagataggagagctttccactgaaggcggtcatacagggagcatatatgctgttagc
tggagttctgatagtaaacaggttctaacagtttctgctgataaatctgcgaaagtatgg
gatatcatggaagatgcaagtgggaagttgaatcgaactttggcttgccctggtatagga
ggtgtggatgatatgcttgttggttgtctctggcagaatgaccatctcgtgacagtctct
cttggtgggacatttaatgtgttctctgcaagcaacccagaccaagaaccagttacattt
gcaggacatttgaagactgttagttctttggtcttctttactaaaagtagcccaagaact
atactatctactagctatgatggtgtcatcatgaggtggatactgggtgttggatttggt
ggcagattgacgcgcaaaaacaacactcaaataaaatgctttgctgcagtagaagaagag
cttgttacctcaggttatgataataaggtcttcagaattccacttaatggagaccagtgt
ggagatgctgagtcagttgatgtaggcggtcagccaaatgctttgaaccttgcacttcaa
aaacctgaatttgcactgatcactactgattctgggattgtattactgcacaactcaaaa
gtcatctctacaaccaaagttaactataccatcacttcatcttcggtatctcctgatggc
acggaagctgttgtgggtgctcaagatgggaaactgcgaatttattccatcagtggcgat
acacttacagaagaagctctgcttgagaagcaccggggcgctatcacttccatacattat
tcaccagatgtttctatgtttgcttctgctgattccaacagggaagctgttgtgtgggat
cgggcaagtagagagatcaagctgaagaacatgttgtaccacacagctaggataaactcc
ctggcttggtcacctgacagtcgattggttgccactggctcactggacacctgtgcaatt
gtctacgagatagacaagccagcaaccagtcgcatcactatcaagggagcccatcttggt
ggagttcatggtttaaccttcctggagaatgatactctggtgactgcaggcgaggatgct
tgcattcgtgtttggaaggtggtgcagcaatag
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