Sorghum bicolor (sorghum): 8070421
Help
Entry
8070421 CDS
T01086
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8070421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8070421
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8070421
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8070421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
8070421
NCBI-ProteinID:
XP_002455270
LinkDB
All DBs
Position
3:7935172..7937317
Genome browser
AA seq
349 aa
AA seq
DB search
MVKSKEKDRPARKSMEELDAFECPICLSLFQGPIFQCKNGHVVCDACRVHIHGTCPSCRE
PVVGDIRCRGLENAMASLALALPCSFRSHGCTELLMHTERRHHEAFLCQHAPSKCPFQGC
PYSGLLLYDHIHDAHSCLDYEVRFGRSAWRGSLHRSRPFKVLLDPVDRRVFLLLNGGDIR
SGRSLSVVCLGPRPAANQLLEYKLKVCGAGKPGSLSLSASGSVPCMRSWAGQYPTDEFLF
VPDAYWTFFNSINANVHVQSSTVNNALESKACSNMCSSSPLVTRMAGRTSCHGRFPSYIL
GFRVRFAAFHLSIVSIVIARLLRNWCLLKLWLVPGHVQATYPAIYKLTR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaagcaaggagaaagatcggccggcgagaaaatcgatggaggagctggacgcg
tttgagtgccccatctgcctctccctgttccaaggacccatcttccagtgcaagaacggg
cacgtcgtgtgtgatgcctgccgggttcacatccatgggacttgcccgtcctgccgcgag
cccgtcgtcggtgacatccgctgccgggggctggagaacgccatggccagcttggccttg
gccctcccctgctcgttcaggagccacgggtgtacggagctgctcatgcacaccgagagg
cggcaccacgaggcgttcctctgccagcatgcgccgtccaagtgcccgttccaagggtgc
ccctactccgggctgctcctctacgaccacatccacgacgcccacagctgcctcgactac
gaggtcaggttcggcaggtccgcgtggcgggggtcgctgcaccggagcaggccgttcaag
gtgctcctggacccggtggaccggcgcgtgttcctgctactcaacggcggggacattcgc
tcgggccggtcgttgtcggtggtctgccttggcccgcgccctgcggccaaccagttgctg
gagtacaagctgaaggtgtgcggtgccggcaaacccggctccctctcgctgtcggcatca
ggctcggtgccctgcatgcgcagctgggcggggcaataccctactgatgagttccttttc
gtgccggacgcgtactggaccttcttcaactccatcaacgccaacgtccatgtgcagagt
tcgacggtcaacaatgccctagaatcaaaggcatgcagcaacatgtgttcttcttcgcca
ctagtcacccgtatggctgggagaacttcatgtcatggaagatttcctagttatatactg
ggtttccgggttaggtttgctgcattccatttgtcaattgtcagtatcgtaattgcaaga
ctcttgagaaattggtgccttttgaagttgtggttagttccggggcatgtacaagccacc
tacccggccatttacaaactaactaggtga
DBGET
integrated database retrieval system
