Sorghum bicolor (sorghum): 8070425
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Entry
8070425 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8070425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8070425
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8070425
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8070425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
Motif
Other DBs
NCBI-GeneID:
8070425
NCBI-ProteinID:
XP_002455276
UniProt:
C5XE62
A0A921RD38
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All DBs
Position
3:8001039..8006252
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AA seq
337 aa
AA seq
DB search
MSSQQQQKRVPDQDGEHANGAKRSRALAIPNGEVKQEQRGQGEEEAGQGEQGEGALVAVE
QAMEEPQINIRMAVSHLHCHACVLPLKPPTFECEAGHVVCRACRGSHVQACAGAGTYVSC
AKLDGIVRDAKVACAYEAFGCTSWVVYYEAPDHHRSCRFAPCSCPAPGCGHFTSPARLVE
HFFSHHAWNVTEVDYAKPCKLAVPGPEDKLVLVGKADGSVFLVSPCAFGAATAAVSLVCV
RACGDVAAGAPQYTCNLWAEVAGNALLLTSVVASSDLVGGFPATDKVMFLPLPQLLYDES
GEPPALMVRIDKVGASTIRSRSPCATPPSSLPRRMLQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccagcagcagcagaagagggttcctgaccaggacggcgagcacgccaacggc
gccaagaggtccagggcgctggccatacccaacggcgaggtgaagcaggagcagcgcggg
cagggagaagaagaggcaggccaaggcgagcagggagagggagctttggttgcggtggag
caagccatggaggagccgcagatcaacatccggatggccgtgtctcatctccactgccat
gcctgcgtcctgcccctcaaacccccaaccttcgagtgcgaggccggccacgtcgtgtgc
cgcgcctgtcgtggcagccacgtccaggcctgcgccggcgccggcacctatgtctcctgc
gccaagctggacgggatcgtgcgcgacgccaaggtggcgtgcgcctacgaggcgttcggc
tgcacgagctgggtcgtctactacgaggcgccggaccaccaccgctcctgccggttcgcg
ccctgctcctgcccggcccctggctgtgggcacttcacctcgccggcgaggctggtcgag
cacttcttcagccaccacgcctggaacgtcaccgaggtcgactacgcgaagccgtgcaag
ctcgccgtcccgggccccgaggacaagctggtcctggtgggcaaggcggacgggtccgtg
ttcctcgtgtctccgtgcgccttcggcgcggccacggcggccgtgtcgctggtgtgcgtg
agggcgtgcggcgacgtggctgcgggggcaccccagtacacgtgtaacctctgggcggag
gtcgcgggcaacgccctgctgctcacgtctgtggtggccagcagcgacctggttggcggc
ttcccagcgaccgacaaggtcatgttcctgccactgccgcagctgctgtacgacgagtcc
ggcgagccgcctgccctcatggtccgcatcgacaaagtcggcgcgtccactatcaggtca
aggtccccgtgtgccactccgccgtcgagcctgcccaggaggatgctgcagtaa
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