KEGG   Sorghum bicolor (sorghum): 8070453
Entry
8070453           CDS       T01086                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8070453
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     8070453
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 8070453
NCBI-ProteinID: XP_002457497
UniProt: C5XEW0 A0A921UPE7
LinkDB
Position
3:complement(8743673..8749735)
AA seq 662 aa
MAAEAPPSASSSSSSAPRPPAAAAAGSGGGGAAGSAESYIGSLISLTSKSEIRYEGVLYN
INTEESSIGLRNVRSFGTEGRKKDGMQIPASDKVYEYILFRGTDIKDLQVKSSPPPPPPP
QAASLHNDPAIIQSHYSQPASTSSSLPSAGGAVLPDLSSQAVQYGLQRPAFQSNLPLYQP
GNAAPWGSSVAPPAGNAPWGSSVAPPAGNASTLSVPSMYWQGYYAPSSGLPPHLQQPPLL
QPTPGLSVPQNLQYPGLNPSLPSGPQKLSELQPSLMPPITSQGPSTGVLPATTAPASATL
LAPESSKPLLPNMGSLFTPPATSLGATFPFPSQPTSVAETSATVSHNLTSFGSNKATALP
GSTLAYQTVSQSVSSTIAPSSSAQVEMPVPLLAPSGQLLQNTSSVLSSSHSMQAPLQVAS
KEVKPVEPKAKVAEPLLPDPLLPDPPSRALPENKEPILPLPKQTPQKYNGSGSHNHHNFR
GRGRGRGSAFSQSVTAFTEEFDFTAMNEKFNKDEVWGHLGKKSQSRDKDGEVGDDVFDED
LEVEETDNPELAVKPVYVKDDFFDSLSSGTFGRGGPNGRGRPSERRRVDTETFGEFPRHR
QPYRGGARGYRGGGRSRGSYYGGRGYGNTGMGGYGNTGTGGYGNTGAGGPGNSYPHRGYG
RD
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcggcggaagcgccaccgtcggcgtcctcctcctcctcctcggccccgcggccgcct
gccgcggccgcggccgggtccggcggcggcggggcggccgggtccgcggagtcgtacatc
gggagcctcatcagcctgacctccaagagcgagatcaggtacgagggcgtcctctacaac
atcaacaccgaggagtccagcatcggcctccgcaatgtgaggtcctttgggaccgaaggg
cggaagaaagacggaatgcagattcctgctagcgacaaagtttacgagtacatcctcttt
cggggaactgatatcaaggacttgcaagttaagtcatcaccaccaccgccaccaccacca
caagcagcttccctgcacaacgatcctgccataatccagtcacattattctcaaccagca
tcaacttcgtcaagtttgccttcagctgggggtgcagttttaccagacctcagctcccag
gcagttcaatatgggcttcagaggccagcttttcagagtaaccttcctctataccaacca
gggaatgctgctccatggggctcttcagtggcacctccagcaggaaatgctccgtggggc
tcttcagtggcgcctccagcaggaaatgcttcaacactttcagttccctcaatgtactgg
caaggatactatgcgccttcaagtgggctgccacctcatttgcagcaacctcctttgctt
cagccaacaccaggattgtcagttccccagaatcttcaatatccaggactaaatccttct
ttgccatctgggccacaaaagctgtcagaactccaaccctcattgatgccacctattact
agtcaaggtccttcgacaggtgtcctgcctgctacaacagctcctgcttctgctacctta
ttagctccagaaagctcaaagcctctgttgccaaacatggggtcattgtttactcctcct
gcaacatctcttggcgcaacttttccttttccaagccagccaacttccgtggctgaaact
agtgcaacagtgtcacataacttaacttcattcggtagcaacaaggctactgctcttcca
ggctcaacactggcataccaaactgtatctcagtctgtttcttcaactattgccccatct
agctcagcccaagtggagatgcccgtgcctttgttggcaccatcaggtcaactattgcag
aacacatcatctgtgctctcatcgtcgcactccatgcaggcaccattacaggtggccagc
aaagaagtcaagccagttgagcctaaggctaaggttgcagaaccattactacctgaccct
ttgctaccagacccaccatcacgggctctgcctgaaaataaggagcctatattgccattg
ccaaaacagacacctcagaagtacaatggatctggttcgcacaaccatcacaactttagg
ggccgtggaaggggtagagggagcgcgttttcacagtctgtaacagcattcactgaagaa
tttgatttcacggccatgaatgagaagtttaacaaagatgaagtctggggtcatcttggt
aagaaatcccagtcaagggacaaggatggtgaggtgggagatgatgtgtttgatgaagac
ctggaggttgaggaaactgacaacccagagctagctgttaagcctgtttatgtcaaggac
gacttttttgattccctctctagtggaacatttggacgtggagggccaaatggaaggggc
agaccttctgaacggcgtagagtagacacagagacgtttggtgaatttccaaggcacagg
cagccttatcgtggtggcgcccgaggttaccgtggtggagggcgttctcgtggttcatat
tatggtggcagaggctatggaaacacagggatgggaggctatggaaacacagggacaggt
ggctatggaaacacaggggcaggtggccctggaaattcgtatcctcaccggggctatggg
agagattga

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