Sorghum bicolor (sorghum): 8070969
Help
Entry
8070969 CDS
T01086
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8070969
09123 Folding, sorting and degradation
03018 RNA degradation
8070969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8070969
03041 Spliceosome [BR:
sbi03041
]
8070969
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
8070969
mRNA degradation factors
5'-3' decay
Lsm complex
8070969
Spliceosome [BR:
sbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
8070969
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
8070969
NCBI-ProteinID:
XP_002447708
UniProt:
C5YET4
LinkDB
All DBs
Position
6:complement(38406280..38415690)
Genome browser
AA seq
97 aa
AA seq
DB search
MSTGGADKPGSGSGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQ
TEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggcggcgcggacaagcctggcagcggtagcggcggcggcgcggtgaagacg
ccgtcggacttcctcaagtccatcaggggccgccccgtagtcgtcaagctcaactccggg
gtcgactacagaggtatattggcttgcctggatggttatatgaacattgcgatggagcag
actgaggagtacgtgaatggtcagttgaagaacaagtatggtgatgcgttcatcaggggc
aacaacgttttgtacatcagcacgtcgaagcggacccttactgatggcgcatag
DBGET
integrated database retrieval system
