Sorghum bicolor (sorghum): 8070976
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Entry
8070976 CDS
T01086
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
8070976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8070976
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
8070976
FA (Fanconi anemia) pathway
8070976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
8070976
NCBI-ProteinID:
XP_021319122
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Position
6:complement(38753402..38770336)
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AA seq
761 aa
AA seq
DB search
MRRRNQVVHSDSDGEGMTTTTTSASVSASVASGGVSGSGSGSVGRPSPPNPSPLPAPFPS
LSPSSAPFVISDDDEEVDEIVDPDGDSPIIDAPEVFSPPAPPARAAPAPPPLTTPSQTPI
PTPPPSQTPIPTPPPARTPIPTPPPARTPTPTPTPPTARTPTPTPPLARTPASTAPPHPS
PLSGRLRPVDEFLLRLGLRLRPDWLESCAAGIPGFDGLGGAEAQARRCFEQFLFADMNSC
GAGVLPEGVGGMHAEFLDGPFVLQVDEIVNISAPLKERYREAPAGPKRCLKLSMTDGVQR
IFGMEYRPIKDLAVLAPAGLKIIIRNVHTRRGLLMLVPEAVEILGGVVDELEEARERLVS
EVNKPPRGKSKQGGLPLSSRATRAAWPSSTNITNGGEQGISMQRSVNSSYPTGSGNAFQV
GGATETVVEELVSPPVGNTVREINMQGLYASLTRETTETSMHTTHSPPVVNTVQGINMQG
LHASLTRKTTETSMHTTHSPPVVTTVQGINMQGLHASLTRETTETSMHTTHNYDPTHIIE
RSTGTIMEECVDPPIIANNVHEQMQRVQSANVVEGVQSPNVGKINEMEQSFILSGENEEP
FTYIYSMLINWGRQQDTKAYIKGKIKGLITSVKSFQYKQCTKYELYVYIDDGSFISEAFI
DSDIVNNMLGLSPGEVTAALSGQFEFASPSEVKETLKRFQRFLVKFEGMMIIELNKNSSI
PVVRELNEGCSSSTAWLLLRRLKTVSSQKRVQTLDIMDTTP
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccggaaccaagtcgtgcattccgactccgacggcgagggcatgaccaccacc
acaacctctgcctcggtttcggcctccgtcgctagcggcggcgtcagcggcagcggaagc
ggaagcgtcggccggccctccccaccaaaccccagccccctcccagcccccttcccctca
ctctctccgtcctctgctcccttcgtcatctccgatgacgacgaggaggtcgacgagatc
gtggaccccgacggggactcccctatcatcgacgcccccgaggtcttctctccgccggct
cctcccgcgcgcgctgctcccgctccccctcctctcactaccccgtcccagaccccaatc
ccgactccacctccgtcccagaccccaatcccgactccgcctccggcccggaccccaatc
ccgactccacctccggcccggaccccaacccccacccccactccgcctacggcccggaca
ccaaccccgactccgcctctggcgcggaccccggcctcaacagcgcctccgcacccgtct
ccgctgagcgggcggttgcggccggtggacgagttcctgctgcggctcgggctgcgtctg
cggccggactggctcgagtcctgcgctgcggggattcccgggttcgacggcctcggtggt
gcggaagcgcaggccaggcggtgcttcgagcagttcctcttcgccgacatgaactcctgc
ggggccggggtgctgccggagggcgttgggggcatgcatgctgagttccttgatggcccc
ttcgtgcttcaggttgatgaaattgtcaatatttcagctcctttaaaggaaagatatcga
gaagcaccggcaggacccaaaagatgtttaaaactatctatgacagatggcgttcaacga
atatttggaatggaatacagacccatcaaagatctggcagttcttgctcctgctggttta
aagattattataaggaatgtacacacaaggaggggccttcttatgctagttcctgaggct
gttgagattcttggtggtgtagttgacgaattggaagaagcacgtgaaagacttgtttct
gaagtaaacaaaccacctcgtggcaaaagtaaacagggcggattacctttatcttcaaga
gccacgcgagctgcctggccatctagtaccaatattacaaatggtggtgagcaagggatc
tcaatgcaaagatcagttaattcctcttatccaacaggatcaggtaatgctttccaggtt
ggtggagctacagaaacagtggttgaagagcttgttagccctcctgtaggaaacactgtc
cgagaaatcaacatgcagggcctatatgcttctcttaccagggaaactactgaaacttct
atgcatactacccatagccctcctgtagtaaacactgtccaaggaatcaacatgcagggc
ctacatgcttctcttaccaggaaaactactgaaacttctatgcatactacccatagccct
cctgtagtaaccactgtccaaggaatcaacatgcagggcctacatgcttctcttaccagg
gaaactactgaaacttctatgcatactacccataactatgatcccactcatatcattgaa
agaagtacagggaccatcatggaagaatgtgtcgatcctcctattatagcaaacaatgtc
catgaacaaatgcagcgagtccaatcagctaacgttgtggagggtgtacagtctccaaat
gttggcaagatcaatgagatggaacagtctttcattctaagtggtgaaaatgaagaacca
tttacgtacatatacagcatgcttattaactggggtagacaacaggacacaaaagcctac
ataaaaggaaaaatcaagggtctgatcacttctgtcaaaagttttcaatataaacaatgc
accaaatatgagctttatgtatatatagatgatgggagtttcatttcagaggccttcatt
gacagtgatattgtgaataacatgcttggtctttctcctggagaggttactgctgctctt
tctggtcaatttgagtttgcatcacccagtgaagtgaaagaaactttgaaacggtttcag
aggtttttggtgaaattcgagggaatgatgattattgagttaaacaaaaactcttctatt
cctgtcgtacgtgagctgaacgaaggttgctcaagttctactgcatggcttctgctccga
aggctgaaaacagtttcttctcaaaagcgcgtgcaaactctggatattatggacaccact
ccatga
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