Sorghum bicolor (sorghum): 8071038
Help
Entry
8071038 CDS
T01086
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00040
Pentose and glucuronate interconversions
sbi01100
Metabolic pathways
Module
sbi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8071038
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
8071038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
8071038
NCBI-ProteinID:
XP_002444237
UniProt:
A0A921U9G2
C5YKE7
LinkDB
All DBs
Position
7:43226395..43228537
Genome browser
AA seq
391 aa
AA seq
DB search
MELRPWLLLVVVAIVVSISADGGTVINVKNYGAHGNGANDDSKPLMAAWKAACGSAGAVT
MVVTPGTYYIGPVQFHGPCKASSLTFQLQGSTLKAATDLSKFGNDWIEFGWVNGLTVTGG
TIDGQGAASWPFNKCPVRKDCKVLPTSVLFVNNQNTVVRDVTSVNPKFFHMALLTVKNIR
MSGLKISAPSNSPNTDGIHIERSSGIQITDTRISTGDDCISIGQGNDNVQIARVQCGPGH
GMSVGSLGRYASEGDVTRVHVRDMTFTGTTNGVRIKTWENSPSKSHAAHMVFENMVMKDV
QNPIIIDQKYCPYYNCEHKYVSGVTIQDIQFKNIKGTAATQVAVLLRCGVPCQGLVLQDV
DLRYKGQGGTLAKCENAKAKYVGNQFPKPCP
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaattgcggccgtggctgctcttagtggtcgtcgcgatcgtcgtgtcaatatctgca
gacggggggaccgtcataaacgtcaagaactacggggcccatggcaatggcgccaatgac
gattccaagccactgatggcggcgtggaaggcagcgtgcggatcagctggcgcggtgacg
atggtcgtgacgccggggacgtactacatcggtccggtgcagttccacggcccctgcaag
gcctccagcttgaccttccagctgcagggtagtacgctcaaggccgccacggacctgagc
aagttcggcaacgactggatcgagttcgggtgggtgaacgggcttaccgtcacaggcggc
accattgacggccagggcgccgcctcgtggcccttcaacaagtgccccgtccgcaaggac
tgcaaagtcctgcccaccagcgtgctgttcgtgaacaaccagaacacagtggtgcgcgac
gtgacgtcagtgaatcccaagttcttccacatggcgctgctgacggtcaagaacatccgg
atgagcgggctcaagatcagcgcgccgtccaacagtcccaacacggatggcatccacatc
gagcgcagcagcggcatacaaatcacggacacgcgcatcagcacgggcgacgactgcatc
tccatcggtcagggcaacgacaacgtgcaaattgcccgcgtgcagtgcggccccggccac
ggcatgagtgtcggcagcttgggtcggtatgccagcgagggcgacgtcacacgggtccac
gtccgcgacatgaccttcacgggcaccacgaacggcgttcgcatcaagacatgggagaac
tccccttccaaaagccacgccgcacacatggttttcgagaacatggtcatgaaggacgtc
cagaaccccattatcatcgaccagaagtactgcccctactacaactgcgagcacaagtac
gtgtccggggtgactatccaggacattcagttcaagaacatcaagggcacggcggcgacc
caggtggcggtgttactacggtgcggtgtgccgtgccagggtctggtgctgcaggacgtg
gaccttaggtacaaggggcagggtggtacattggccaagtgcgagaatgccaaggccaag
tacgttggcaaccagtttcccaagccgtgcccgtag
DBGET
integrated database retrieval system
