Sorghum bicolor (sorghum): 8071117
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Entry
8071117 CDS
T01086
Name
(RefSeq) homeobox-leucine zipper protein ROC1
KO
K09338
homeobox-leucine zipper protein
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8071117
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
8071117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DivIC
HTH_Tnp_1
MRP-L20
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
8071117
NCBI-ProteinID:
XP_002443965
UniProt:
C5YI05
LinkDB
All DBs
Position
7:6922369..6928211
Genome browser
AA seq
781 aa
AA seq
DB search
MTPARRMPAMIGRNGMAFGSSSALSLSQADLLDSHHLQQAFQQQLFDQIPATAVDSSDNI
IHGRSDTLVDEFESKSCSENPDGTSGDDGQEDPNQRPNKKKRYHRHTQHQIQEMEAFFKE
CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAENDKLRAENMRY
KEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPVL
SSPLAAAAARSPLDLAGAYGVQPGGLGADHLFGVGAGAGDLLRSVSTGQLDADKPMIVEL
AVAAMDELLRMARLDAPLWGGGVAGVQLDEEEYGRMFPGGLGPRQYGLRPEASRDNAVVI
MTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLVP
TRESYFVRYCKNNPDGTWAVVDVSLDSLRPSPVMKCRRRPSGCLIQEMPNGYSKVTWVEH
VEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGR
KSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAAT
SFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSLLRVNSANSN
QSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPPGMAP
HGEGAALETGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVCVEGNP
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggcgaggcgcatgccggcgatgatcggtcggaatggcatggcgtttgggtcc
tcgtcggcgctgtctttaagccaggctgacctcctagacagccatcacctgcagcaagcg
ttccaacagcaactctttgatcagatcccagccaccgcagtggatagcagcgacaacatc
atccatggtcgctccgacacgctggtagatgaatttgagagcaagtcctgcagtgagaat
cctgatggcacctctggcgatgatggccaggaagaccccaaccagcggccaaacaagaag
aagcggtatcaccgccacacccagcaccagatccaagagatggaggcgttcttcaaggag
tgcccacacccggatgacaagcagagaaaggagctcagccgggagctcggcctcgagcca
ctgcaggtcaagttttggttccagaacaagcgcacacagatgaagaaccagcatgagcgg
caggagaacgcgcagctgcgcgcagagaatgacaagctgcgagctgagaatatgcggtac
aaggaagcactcggcacagcctcctgccccagctgtggcggccctgccgccctcggtgag
atgtcctttgacgagcaccacctccgtctcgagaacgctcgcctccgtgatgagattgac
cggatttcgggcatcgctgccaagcacgtcggcaagcccatggtctccttcccggtgctc
tccagcccacttgctgctgctgccgcccgatccccacttgaccttgctggtgcctacggc
gtccagcctggtggcctcggtgccgaccacctattcggtgttggagctggtgccggtgat
ctgctgagaagcgtgtcaaccggccagctcgacgctgacaagcccatgattgtagagctg
gccgttgctgccatggatgagctcctccgaatggcgcggcttgatgcgccgctgtggggt
gggggcgtggcaggcgtgcagctggacgaggaggagtatggccggatgttcccgggtggg
ctcgggccgaggcagtacgggcttcgtccggaggcatctcgagacaatgccgtcgtgatc
atgacacgcgatagccttgttgagatactcatggacgcgaaccgattcgctgcagtgttc
tcaagcattgtgtcgagggcttctacacacgaggtgttgtcaactggtgtggcagggagc
tataatggtgcattacaagtgatgtcaatggagttccaggtgccatcaccactggtgccg
acgagggagagctactttgtgaggtactgcaagaacaatcccgatggaacgtgggctgtt
gttgatgtctcgctcgacagcctccgtcctagccctgttatgaagtgccggcgcaggcca
tcaggatgccttatccaagaaatgcccaatggctactcaaaggtgacctgggtggagcac
gttgaggttgatgacagatcagtgcacaatctctacaggcctttggtcaattcaggcctc
gcatttggtgcaaaaaggtgggttggcacactggaccgacaatgcgagcgccttgccagt
gccatggccagcaacatccccaacggcgacctcggtgtgatcacaagcatagaggggagg
aagagcatgctgaagctagctgagaggatggtggcgagcttctgcggcggcgtgacagca
tctgccgcacatcagtggacaacattgtcagggagtggtgcagaggacgtccgtgttatg
accaggaagagcgtggacgacccgggcaggccgccgggcatcgtcctcaatgccgccacc
tccttctggctacccgtcccacccaagagggtctttgatttcctccgcgatgagacctct
cgcagcgagtgggacatcctatccaacggtggtgctgtccaagaaatggctcatattgcc
aacggccgggaccatggcaactgtgtctcccttcttcgtgtcaatagtgcaaactcgaac
cagagcaacatgctgatcctccaggagagctgcaccgacgcatctggctcgtatgtggtg
tacgcaccagtggacgtggtggcaatgaacgtggtgctcaatggcggggacccagactac
gtggccctactgccatcgggcttcgctatcctccccgatggaccacccggcatggctccc
catggagagggtgccgccttggagactggcggtggttccctcttgacggtggcgttccag
atcctggtggactccgtgcctactgcaaagctctccctgggctctgtagcaactgtgaac
agcctcatcgcctgcaccgtggagcgcatcaaggctgccgtctgcgtggaaggcaaccca
cagtag
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