Sorghum bicolor (sorghum): 8071280
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Entry
8071280 CDS
T01086
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8071280
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8071280
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
8071280
Protein phosphatases and associated proteins [BR:
sbi01009
]
HAD phosphatases
Fcp/Scp phosphatases
8071280
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
8071280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Whib
Motif
Other DBs
NCBI-GeneID:
8071280
NCBI-ProteinID:
XP_002440538
LinkDB
All DBs
Position
9:complement(2931357..2936088)
Genome browser
AA seq
746 aa
AA seq
DB search
MSSPAAAAAAEAPRTVASAVLRIQMALLDGAAASNEALLHAAASALLSRADYDDVVTERT
IADACGNPACPNPLPSSSSAAAATGPRFHIALSEHRVYDLEEARKFCSDRCLVASKALAA
SLPHDRPYGVPLDRLAAVVALVEGAAAAGDGSGLGFQGVDGNVKMKDEGRKVEIKEKEVA
GAGEVSLQDWIGPSDAIEGYVPRRDRSAHGQKPQAEQNKVAGSDLSRTKNVDDRTAAPSE
DGMTSPLSLVETHMSAEVMAERMGDLVLGENTKTLSRKKKTKTPSKMMEQEEDDSMLSSC
ISDSIAKQLEDVVLEERKGSKKNKVSKASSRTHKSKSRKRPAGSDGHEVDFTSTIIIGDA
STNREESAMNQYNYLSSSVLVDNHPSSSQSSAKDSTQAYAEQLCEEFSEAVNIGNDETTD
EKMRPALKPSLKVTGSKSGRQSVTWADENGSVLETSKAYESPSSSIKQPNEGIDSSLRRA
SAEACAAALIEAAEAISSGTAETEDAVSKAGIIILPDMLNQKEYGDAKNNGGDDDPEIDR
DVIKWPKKPVLLDTDMFEVDDSWHDTPPEGFSLTLSAFGTIWAALFGWISRSSLAYVYGL
ERGSVEELLIANGREYPEKIVLKDGLSSEIRRALDSCVCNAVPVLISNLRLQIPVSKLEI
TLGYLIDTMSFVEALPSLRSRQWQAVVLVMLDALSVHQLPALAPVFSNSKLVQKMLNAAQ
VSREEYDSMVDLFLPFGRSVQATTPM
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagctccccggccgccgccgccgcggcggaggcgccgcgaacggtggcctcagcggtg
ctgcgcatccagatggcgctgctggacggcgccgcggcgtcaaacgaggcgctcctccac
gcggccgcctccgcgctgctctcccgcgccgactacgacgacgtcgtcaccgagcgcacc
atcgccgacgcctgcggcaaccccgcgtgccccaaccctctcccctcctcctcctccgcc
gccgccgccacggggccacgcttccacatcgccctcagcgagcaccgcgtctacgacctc
gaggaggcgcgcaagttctgctccgaccgctgcctcgtcgcctccaaggcactggccgcc
tcgctcccgcacgaccggccctatggggtcccgctcgaccggctcgctgcggttgtcgcg
ctcgtcgagggcgccgccgctgccggggacgggagcgggttagggtttcagggcgtggat
gggaatgtgaagatgaaggacgagggaaggaaggtggagatcaaggagaaggaggtcgcc
ggggctggggaggtttcgctgcaggactggattgggccctccgatgccattgagggttat
gtgccgcgccgtgaccgcagtgcccatgggcaaaagccacaggctgagcagaataaagtt
gctggatctgatctgtccagaactaagaatgtggatgataggactgctgctcctagtgaa
gatggcatgacaagtccactttcattggttgaaacacacatgagcgctgaagtaatggct
gagagaatgggcgacctggttcttggtgagaatacaaagacacttagtagaaagaagaaa
accaaaaccccatcaaagatgatggagcaagaggaagatgacagtatgctgtcatcttgc
atatctgattctattgccaagcagctcgaggatgtagttttggaagagagaaaaggcagt
aagaaaaataaagtgagtaaagcatcatcgaggacacataagagtaagtctagaaaaagg
cctgctggaagcgatggccacgaggtggacttcacgagtaccatcattattggggatgct
tcgacaaacagggaggaaagtgctatgaatcagtataactatttgtcaagttctgtattg
gtagacaatcatccctcgtcatctcaatcttcagcaaaagattcaacgcaagcttatgct
gaacaactgtgcgaagaattcagtgaagcagtgaacataggaaatgatgagacaactgat
gaaaagatgaggcctgcattgaagccttcgttgaaagttactgggtctaagagcggtaga
cagtctgttacgtgggcagatgagaatggaagtgtcctagaaactagcaaagcatatgaa
agcccctcaagtagcataaaacaacccaacgaaggcatagacagttcactaaggcgtgca
tctgcagaggcatgtgctgcagcacttattgaggcagcagaagctatttcttcaggcaca
gcagaaacagaagatgcagtttcaaaggctggaatcatcattctgcctgacatgcttaac
cagaaagaatatggcgatgccaaaaacaatggcggagatgatgaccctgagatagatagg
gatgttatcaagtggcctaagaaacctgtacttttggatacagacatgtttgaagttgac
gattcttggcatgacacgcctccagaaggttttagtctaactctgtctgctttcggaaca
atttgggctgcgctattcggatggatatccaggtcatctttggcctatgtgtatgggctt
gaaaggggttcagtggaagagttgttgattgccaatgggagggaatatcctgagaagata
gttctgaaggatgggctctcatcggagattagaagagctctagattcttgtgtttgtaat
gctgtgccagtactcatatcaaacttgaggttgcagataccggtttcaaaattggagatt
actttgggctacttgattgacacaatgtctttcgttgaagccctgccttctctgcgatca
aggcagtggcaggctgtggttctggtaatgcttgatgccctctctgttcaccagcttcct
gcccttgctccagtcttttcaaattcgaagcttgtgcaaaagatgttgaatgccgctcag
gttagcagagaggagtatgactccatggtggacctgttcctcccttttggaagatccgtc
caggccaccacacccatgtag
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