Sorghum bicolor (sorghum): 8071298
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Entry
8071298 CDS
T01086
Name
(RefSeq) uncharacterized RNA-binding protein C23A1.09
KO
K12876
RNA-binding protein 8A
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
sbi03015
mRNA surveillance pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8071298
09122 Translation
03013 Nucleocytoplasmic transport
8071298
03015 mRNA surveillance pathway
8071298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8071298
03041 Spliceosome [BR:
sbi03041
]
8071298
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
8071298
Spliceosome [BR:
sbi03041
]
Complex C
Other components
EJC/TREX
8071298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
8071298
NCBI-ProteinID:
XP_002439249
UniProt:
C5YZM3
A0A921U3Q6
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All DBs
Position
9:3495553..3499806
Genome browser
AA seq
200 aa
AA seq
DB search
MAAVTNADVEVVDFDLDDDDLMDEDAGPDPAPAPAPASRLRSTIAGDDAPRRTKGRGFRE
DPNSSAHRDSRFGAGGRADLDSLGGPGPIQSIEGWIVLVTGVHEEAQEDDLQNAFQEFGQ
VKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDGAELHEQIMSVDWAFSSGPAKRR
NTRKRSPPRARSRTPPRRRH
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgacgaacgccgacgtggaggtggtcgacttcgacctcgacgacgacgac
ctcatggacgaggacgccgggccggatccagcgccggcccccgcccctgcctcccgcctc
cgctccaccatcgcgggcgacgacgcgccgcgtaggaccaagggccgcggcttccgcgag
gaccctaactcctccgcgcaccgcgactcccgctttggcgcggggggacgcgccgacctc
gactcgctcggcggcccgggacccatccaatcaattgaaggatggattgtgttggtcact
ggagttcatgaagaagctcaagaagatgaccttcaaaatgctttccaagaatttgggcag
gtcaaaaacctgcatttgaatttggaccgtcgtaccggatttgtcaaggggtacgctttg
attgaatacgagaagtttgaagaagctcaggctgcaataaaagaattggatggagctgag
cttcatgagcaaataatgagtgttgattgggcatttagcagtggccctgctaagcgcaga
aatactcgaaaaaggtcaccaccaagagctcgttcaaggaccccacccaggagaaggcac
tga
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