Sorghum bicolor (sorghum): 8071347
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Entry
8071347 CDS
T01086
Name
(RefSeq) long chain acyl-CoA synthetase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00061
Fatty acid biosynthesis
sbi00071
Fatty acid degradation
sbi01100
Metabolic pathways
sbi01212
Fatty acid metabolism
sbi04146
Peroxisome
Module
sbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8071347
00071 Fatty acid degradation
8071347
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8071347
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbi01004
]
8071347
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8071347
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8071347
Lipid biosynthesis proteins [BR:
sbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8071347
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
8071347
Exosomal proteins of breast cancer cells
8071347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
8071347
NCBI-ProteinID:
XP_002436512
UniProt:
C5Z4E9
LinkDB
All DBs
Position
10:3535421..3545630
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AA seq
649 aa
AA seq
DB search
MKHLVEVEPATATTGPAYRNARAKDGLLQAPPGLHSCWDIFRTSVEKYPNNQMLGRRRVV
DGKAGEYTWVTYKEVYDVVMKLAASIDKSGIKQGESCGIYGANCPEWIISMEACNALGVC
CVPLYDSLGAGAVEFIICHAEIQIAFVEEKKITELLKTCHATSKYLKTVISFGGVTNDHK
DEAKNYGLSIFSWEEFLIMGGSHNFDLPEKKISDICTIMYTSGTTGDPKGVMISNESLLV
NITGPDSVLQYIGEVLDQDDVYLSYLPLAHIFDRMFEEVFIYHGSKIGFWRGDVKLLVDD
IAALKPTIFCAVPRVLDRIYSGLTARISSGGILKKTLFNIAYKMKLDSMRKGIKHEKAAP
FFDKLVFSKVKERLGGKLRVIVSGGAPLSVPVEEFLRVVTCAYVIQGYGLTETCAGSIVS
IPNQYSMLGTVGPPVPHIDVRLESVPEMGYHALSSVPRGEICIRGSVLFSGYYKREDLVQ
EVMIDGWFHTGDIGEWQPDGSLKVIDRKKNIFKLSQGEYVAVENLENVYGVLQDIDSIWV
YGNSFESSLVAVVNPNQQSLERWAEQNGTAGSFAELCEHSRAKEHILAELTKIAKEKKLK
GFEFIKAIHLDPLPFDIERDLITPTYKKKRPQMLKYYQGVIDALYKSMK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacctggtggaggtggagccggcgacggcgaccacgggtccggcgtaccggaac
gcgcgggccaaggacggcctcctgcaggctccgccggggctccacagctgctgggacatc
ttccggacgtccgtggagaagtaccccaacaaccagatgctaggtcgtcggcgagtggtc
gatggcaaggcgggcgaatacacctgggtgacttacaaggaagtctatgatgttgtgatg
aagcttgcagcctccattgacaaatccggaatcaaacagggtgaaagctgcggtatatac
ggcgcaaactgccccgaatggatcatcagcatggaggcttgcaacgcgcttggggtttgc
tgcgttcccctctacgattctctcggtgctggggccgtggagtttatcatatgccatgcc
gaaatccagatcgcgtttgtggaggaaaagaagatcacagagctcctgaaaacttgtcat
gctacttcgaagtatctgaaaacggtcataagctttggaggagtcacaaatgaccataaa
gatgaagctaaaaactatggcctgtccattttctcttgggaggaattcctgatcatgggt
ggctctcataattttgatttgcctgaaaagaagatatctgacatctgtacaataatgtat
acaagcggcacaacgggagatcctaaaggagttatgatatcaaatgaaagccttcttgta
aatatcacaggccccgattctgtacttcagtatattggtgaagttttagatcaagatgat
gtctatttgtcatatcttccactagcccatatctttgatagaatgtttgaggaagtgttc
atttaccatggatcaaagatcggattttggcgtggggatgtcaaactattggttgatgac
attgcagcactaaaaccaacaatattctgtgctgttccacgtgtgctggataggatatat
tcaggtcttacagctaggatttcgtctggtggtatactgaagaaaactttattcaacatc
gcttataagatgaaactggacagtatgaggaaaggaattaaacatgagaaggcagcccca
ttctttgacaaattagttttcagcaaggtgaaagaaaggcttggtggaaaattaagagtt
attgtatctggaggtgcccctctatctgtaccagtggaagaatttttgagggttgtgaca
tgtgcttatgttattcaaggctatggactgacggaaacttgtgcgggatctatagtttcg
ataccaaatcaatactccatgcttgggactgttggtccacctgttccacatattgatgta
cgccttgagtcagttccagagatgggttatcatgctttgtctagtgtcccacgtggagag
atatgcataaggggaagtgttctgttctctggatactacaaaagagaggaccttgtgcag
gaagtcatgattgatggctggtttcacactggagatattggtgagtggcaaccagatgga
tccttaaaagtgattgatagaaagaagaatattttcaagctttcgcagggggaatacgtt
gcagtggaaaatctagagaatgtatacggtgttcttcaagatatagattcaatatgggta
tatgggaatagttttgaatcttctcttgtcgctgttgttaatccgaaccaacaatctctt
gagcgctgggcggaacaaaacggtactgctggaagttttgctgaactatgcgagcattcc
agagccaaagaacatattcttgcagagctcacgaagattgcgaaggaaaagaagctgaaa
ggttttgagttcataaaagctatccatcttgacccgttgccatttgatatcgaacgcgat
ctcatcaccccaacatacaagaagaaacggccacaaatgctcaaatactaccagggagta
attgatgcactctacaaaagcatgaagtaa
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