Sorghum bicolor (sorghum): 8071439
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Entry
8071439 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8071439 isoform X2
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8071439
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8071439
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8071439
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Atypical E3
8071439
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
8071439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
HalOD2
DUF5968
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
8071439
NCBI-ProteinID:
XP_002442707
UniProt:
C5YQP4
LinkDB
All DBs
Position
8:complement(1535103..1538709)
Genome browser
AA seq
335 aa
AA seq
DB search
MAPLSWRHHTLLQALLHRGPLSERDFHAVFAGVSGKDPATHQQLFNDTLLKINKDLAYLQ
FELRACINQYDGMVYYGVVNNIVDEESKLGTKYSVPQIAFYKGLLEAIVQEAGTDGSITS
IDALNVRLENQIVIVDGSEDSQSRVPSSIKNFSLSQKENTLDELIRDRWLSYTSTGKIGL
GTRSFLDLRSWFRGNDIPSCVVCNEACIKASSCLNEGCNVRIHEYCLKKKFSQRKASRAC
SSCGTEWPCQDGEADGDDDVNEPGEDQVSSANRSSRKKRKRVKAELVEENNNAGPSMEVP
RRILRSAKAEAVEAAQEASSAGASQPDRGSKRRKK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgtcgtggcggcaccacaccctgctgcaggcgctgctccaccgcggcccg
ctctccgagcgcgacttccacgccgtcttcgccggcgtctctggcaaggaccccgccact
catcaacaactgttcaatgatacacttctcaagatcaataaggacctcgcctatttgcag
ttcgagttgcgggcatgcataaaccaatatgatggaatggtttattacggagttgttaat
aacattgttgatgaagaatctaagctcggaacaaagtattctgtgccccagattgcattc
tacaagggactgttagaagcaatagttcaggaagctggaactgatgggagcataaccagt
attgacgctctcaatgtccggcttgaaaaccagattgtaattgtagacggttcagaggac
agccaatctcgcgttcctagttccataaagaacttctcactgagccagaaagagaatact
cttgatgaactgatacgggatcgttggttgtcatacacctccacaggcaagattggtctg
ggcaccagatcatttcttgatctccgaagctggttccgtggtaatgatatcccatcttgt
gttgtctgcaacgaagcttgtataaaggcatcaagttgtttaaatgagggatgcaatgtt
agaattcatgagtactgcttaaagaagaaattttcacaaagaaaggcttcaagagcttgt
tctagttgtggtactgaatggccctgtcaggacggtgaagctgatggtgatgatgatgta
aatgaacctggggaagatcaagtctcatcagccaatcgttcctcgaggaagaagcgcaag
agagtcaaagctgaactggtggaagaaaataacaatgcaggcccatcaatggaggtgcct
aggaggatcttgagaagtgctaaagccgaagcagtcgaggctgctcaagaggcgtcttct
gctggagcttcgcagccagacaggggttccaaaagaaggaagaagtag
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