Sorghum bicolor (sorghum): 8071625
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Entry
8071625 CDS
T01086
Name
(RefSeq) citrate synthase 4, mitochondrial
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00020
Citrate cycle (TCA cycle)
sbi00630
Glyoxylate and dicarboxylate metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01200
Carbon metabolism
sbi01210
2-Oxocarboxylic acid metabolism
sbi01230
Biosynthesis of amino acids
Module
sbi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sbi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
8071625
00630 Glyoxylate and dicarboxylate metabolism
8071625
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
8071625
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-GeneID:
8071625
NCBI-ProteinID:
XP_021314179
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Position
4:complement(6409700..6415807)
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AA seq
472 aa
AA seq
DB search
MAFFRGLTAVSRLRSRMAQEATTLGGVRWLQMQSASDLDLKSQMQELIPEQQDRLKKLKS
EHGKVQLGNITVDMVLGGMRGMTGMLWETSLLDPEEGIRFRGLSIPECQKVLPTAVKGGE
PLPEGLLWLLLTGKVPTKEQVDALSKELLARSTVPAHVYKAIDALPVTAHPMTQFTTGVM
ALQVESEFQKAYDNGLPKSKFWEPTYEDCLNLIARLPPVASYVYRRIFKGGKSIEADNSL
DYAANFSHMLGFDDPKMLELMRLYVTIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALN
GLAGPLHGLANQEVLLWIKSVIEETGSDVTTDQLKDYVWKTLKSGKVVPGFGHGVLRKTD
PRYSCQREFALKHLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGL
SEARYYTVLFGVSRSMGIGSQLIWDRALGLPLERPKSVTMEWLENYCKNKAA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttccggggcctcaccgcggtctcgagactgcgatcccgcatggcgcaggag
gccaccacgctgggtggtgtgagatggctgcagatgcagagcgcgtccgatctcgatctt
aagtcccagatgcaggaattgattccggaacaacaggatcgcttaaagaagcttaagtca
gagcatggaaaggtccagcttggaaacataactgtggatatggtccttggtggaatgaga
gggatgactggaatgctttgggaaacatccctgcttgacccagaggagggtattcgtttt
aggggcctctcaattccagagtgccagaaagtgctgccaaccgcagttaagggtggtgaa
cctttgcctgagggtctcctttggcttcttttgacggggaaggtcccaaccaaagagcaa
gttgatgctctatcaaaggaattgcttgcgcgctcaactgtcccagctcatgtctataag
gcaatagatgctctcccagtaactgcacatcctatgacacagtttaccacgggggtaatg
gctcttcaggttgagagcgaatttcaaaaagcatacgacaatggattgccaaaatcaaag
ttttgggagcctacttatgaagactgcttaaatttgattgctcggcttccaccagtggct
tcttatgtttaccgcagaattttcaagggtggaaaatcaatagaagctgataattctctg
gattatgcggcaaatttctcacacatgcttggttttgacgaccccaaaatgctggagctg
atgcggctctatgtaacaattcacactgatcatgaaggtgggaatgtcagtgctcatact
ggtcatctggttgggagtgctctgtcagatccttatctttctttcgcagcagctctgaat
gggttagctgggccgctgcatggccttgcaaatcaggaagtgcttctatggatcaaatct
gtaattgaggaaactgggagtgatgttacaacagatcaactcaaagactatgtctggaag
acactaaagagtggaaaggtcgttcctgggtttggtcatggagttctgcgtaagacggac
ccacggtattcatgtcaaagggagtttgccctgaagcatttgcccgaggatccacttttc
caattggtgtccaagttgtatgaagttgtacctccgatcctcactgagctgggcaaggtc
aagaacccctggccgaatgttgatgctcacagtggagttttgctgaaccactttggacta
tctgaagcacggtattacactgtcttgttcggtgtttcgagaagcatggggataggatct
cagctcatctgggaccgtgcccttggcctgccacttgagaggccgaagagtgtcaccatg
gagtggctggagaactactgcaagaacaaggctgcttga
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