Sorghum bicolor (sorghum): 8071691
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Entry
8071691 CDS
T01086
Name
(RefSeq) mRNA-capping enzyme isoform X2
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8071691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8071691
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
8071691
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
8071691
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
8071691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
PTP-SAK
Tc-R-P
Y_phosphatase
Y_phosphatase3
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
8071691
NCBI-ProteinID:
XP_002449367
UniProt:
A0A921QWV7
C5Y1R0
LinkDB
All DBs
Position
5:16889859..16902901
Genome browser
AA seq
679 aa
AA seq
DB search
MTFSMDMDLNASPVPDDDEQQPYDEPVEVDYAQEGHVESAVATLRREREERRKKLKREQQ
DDGSRLHSQQIRNDYAPQPKRHSRFKEAPQGWLDCPAFGEPIDKIIPSKVPLDETFNESV
PPGKRYSSKQLVNKQRKAGREIGLVIDLTNTTRYYSPAEWTRQGTKYAKIACKGRDAVPD
NESVNKFVYEAMMFLDRQKQSKNPKYILVHCTHGHNRTGFMIIHYLMRTHVSCVAEAINI
FAQRRPPGIYKRDYIEALYSFYHEVPENMMLACPPTPEWKRPDDLDLNGEAKQDDDDDNG
DPEPLRNESEDKIITNDDVLGDEVPYDQQEALRVLCYRLLEMPLVRGHSQFPGSHPVSLN
SENLQLLRQRYYFATWKADGTRYMMLIMRDGCFLIDRNFCFRRVQMRFPHKSLEGLHDMT
LIDGEMIIDTVPDSGLKRRYLAYDLMALGAVSKTKLPFSERWKMLEDEIIRPRYHEKKQF
ESGAKSNPLYKYDMELFSVRRKDFWLLSTVKKVLKEFIPSLCHDADGLIFQGWDDPYVTR
THEGLLKWKYPEMNSVDFLFELTNDNRQLVFLYERGKKKLMDGARIAFTDDVDPSSVAGR
IVECSWNKEEQCWACMRIRSDKSTPNDINTYRKVMRSITDNITEEKLLEEIDEIRRLPMY
ADRMHAHTKMAQQRRRLPP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaccttctctatggatatggatttgaacgcatcgcctgtgcctgacgatgatgagcag
cagccttatgatgagccagtggaggttgattatgctcaggaggggcatgttgaatctgct
gtcgcaacattgcgccgggagcgtgaagagagacgcaagaaactaaagagagagcagcag
gatgatgggtcaaggctacattcccagcagattaggaatgattatgcccctcaacccaaa
aggcatagtcgctttaaagaggcacctcagggctggttggactgtcctgcatttggggag
ccaatagataaaatcataccatctaaagttcctcttgatgaaacattcaatgagtcagtg
cctcctgggaagcgatactcctcaaagcaactagttaacaaacaaagaaaagctggccgc
gaaataggtctggtgattgatttgacaaataccacccggtattattcaccagcagaatgg
acgaggcaaggtactaagtatgcgaagattgcatgcaaggggagagatgctgtacctgac
aatgaatctgttaataagtttgtctatgaggcaatgatgttccttgatcgacaaaaacaa
tcaaagaatcctaaatatattctggttcactgtacccatggccataatcgtacgggtttc
atgattattcattaccttatgcgcacacacgtctcttgtgttgctgaggcgataaatata
tttgctcaaaggcggccacctggcatatacaagagggactatattgaagcactgtattca
ttttaccatgaggtccctgagaatatgatgctagcatgccctccaacaccagaatggaag
agaccagatgatctcgatttaaatggtgaagctaagcaggatgatgatgatgacaatggt
gatcctgaaccactgcgtaatgaatcagaggataaaataatcaccaacgacgatgtgtta
ggggacgaagtgccatatgaccagcaagaagctttgcgtgtcctatgttatcggttgctt
gaaatgccccttgtaagggggcattcacaatttcctggatcacatccagtttctcttaac
agtgaaaatctacaactacttaggcagcgatactactttgctacatggaaagctgatgga
acacgatatatgatgcttataatgagagatggttgtttcttgattgatcggaatttttgc
ttcagaagggttcagatgcgctttccccataagagccttgaaggtctgcatgatatgacc
ttgattgatggagagatgattatagacacggtaccagattcaggcttgaagagaaggtac
ttggcatatgatcttatggcacttggtgcagtgtccaaaactaagttgccattttctgaa
aggtggaaaatgctggaagatgaaataatacggccacgttatcatgagaaaaagcaattt
gagagtggtgctaagagcaatccgttgtacaaatatgacatggaattattttcggttagg
agaaaggatttttggctgctctcaacagtaaaaaaggttcttaaggagttcattccatcg
ctttgccatgatgctgatggccttatatttcagggctgggatgatccatatgtaactcgt
actcatgaaggtcttctgaagtggaagtaccctgagatgaattctgtggacttccttttt
gagcttacaaatgataatcgtcaattggttttcctttatgagagaggaaaaaagaaactt
atggatggtgctcggatagcatttactgatgatgtagatccatcctctgtcgctgggagg
attgttgagtgctcctggaataaggaagaacagtgttgggcctgtatgcgtattagatct
gataaatcgactccaaatgacatcaacacataccggaaggtgatgaggagtattacagat
aacattaccgaggaaaagcttctcgaagagattgatgagataaggcgcctcccaatgtat
gccgataggatgcatgctcatacgaagatggcacaacagcggcgaagattgccaccatag
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