Sorghum bicolor (sorghum): 8071757
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Entry
8071757 CDS
T01086
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8071757
Enzymes [BR:
sbi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
8071757
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
8071757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
8071757
NCBI-ProteinID:
XP_002454364
LinkDB
All DBs
Position
4:complement(60196441..60202105)
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AA seq
692 aa
AA seq
DB search
MAKRKQQPPPPAPTAKKGSKVVPPPKALPLPEEDSDLDVSDAEELSLSDAEADELSGSDA
DADGGSSSGDDVEEEEEDEEEEGDESDDEPLADDFLAGSDEGSDGGDSGLESDESDDLEA
KSRAIDEQKLKAEEDAEKELQINIRSESDEFRLPTAEELEEEAHRPPNLPNLKRRISEIV
RVLSNFSKLRQKDVPRKDYINQLKTDIMSYYGYNDFLVEALIEMFPAVELVELLEAFEKR
PPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWSKVGLVVYDSTISAGATTEYMAGHYM
KQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYIGALMKNTGIIYANEFNEKRLHGLLG
NIHRMGVTNTIVSNYDGKELPKVLGMNSVDRVLLDAPCTGTGTIWKDLQIKTSKDIEDIR
NCAFVQKQLLLAAIDLVDANSKTGGYIVYSTCSIMIPENEAVIDYALKKRNVKLVPCGLD
FGRPGFIRYREHRFHTSLEKTRRFYPHVNNMDGFFVAKLKKLSNTIPVTSEPSKASEEAA
EKADGEDEKAISNEQETAVPGEDEKTVQMKNQKKAKVTNKRTSVTKDTGGHKHESNRPGK
HLKKNKDKDTKEIDGPESTETNGDRKEEHREQTKQRSHKRKFASNNSKKAGPESNLGVKE
KRQVSDKKPKRKFKLRREWEAEKKKDAKRRKI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagaaagcagcagccgccgccgccggctcccacggcgaagaaggggagcaag
gttgtgcccccaccgaaggctctgccgctcccagaggaggactccgacctcgacgtctcc
gacgccgaggagctctctttgtcggacgctgaggctgacgagctctcgggctcggacgca
gatgccgacggaggctcgagcagcggcgacgacgtggaggaggaggaggaggatgaggag
gaggaaggtgatgaaagcgacgatgaaccccttgcggacgacttcctcgctggtagcgac
gaaggaagcgatggtggtgactctggactggagtcagatgagtctgatgacctcgaggca
aagtcacgagcaattgatgagcagaaactcaaggcggaagaagatgcagagaaggaactt
caaatcaacataagatcagaatctgacgagttcagattacccacggcagaggagctggag
gaagaggcacacagaccacctaacctaccaaatctcaaaaggaggatatcagaaattgtt
cgagtgctctcaaacttcagcaagctgaggcagaaagatgttccgcgaaaagattatatc
aatcaactgaaaactgacatcatgtcatactatggatataatgattttctcgttgaagca
ttaattgagatgttcccagctgttgagcttgttgagttactggaagcctttgagaaaaga
ccgcctgagtgcttgcggacaaatacactaaagacccggaggagggatcttgctgctgct
cttataccaagaggatttaatttggacccaataggcaaatggtcaaaggtaggattagtt
gtctatgactcaaccatttcagctggtgctactactgaatatatggctggacattacatg
aaacaaggtgcaagttctttcttaccagtgatggcacttgctccacaggagaaggagcga
attgttgatatggctgctgctccaggcggtaagactacgtacattggcgcccttatgaag
aatactggaatcatctatgcaaatgagttcaatgagaaaaggttgcatggacttttggga
aacatccatcgcatgggcgtgacaaataccatagttagtaactatgatggtaaagagcta
cccaaagttctcggcatgaattcggttgacagagtattgctggatgctccttgcacagga
actgggaccatctggaaggatctacaaatcaaaacatcaaaggacattgaagatatcagg
aactgtgcctttgtccaaaagcaattgctgctagctgctattgatttggttgatgccaac
tccaaaactggtggttacattgtttactcaacttgttcgataatgatcccagagaacgag
gcagtaattgactatgcacttaaaaagagaaacgtgaagcttgtgccttgtgggttggat
tttgggcgtccaggattcatccggtaccgggagcatcggtttcatacttctttagaaaaa
acaagaagattttatcctcatgtcaataacatggatggattttttgtagctaagctgaaa
aagttgagcaatacaatcccggtgacatctgagccgtctaaagcgtctgaagaagcagct
gagaaggctgatggcgaagatgagaaagctatttctaatgaacaagagacagctgttcct
ggtgaagacgagaaaactgttcagatgaaaaatcagaaaaaggccaaggtgactaataaa
agaacaagtgtcaccaaagatactggaggccataaacatgaatctaataggccaggaaag
catctcaagaaaaataaggataaggataccaaggaaattgatggccctgaaagcactgaa
acaaatggagacaggaaagaggagcatcgtgaacaaaccaagcaaagaagccacaaaagg
aagtttgcctctaataattccaaaaaagctggccctgagagcaatttgggtgtcaaagag
aagagacaggtcagtgacaagaagccaaaaaggaaattcaagctgaggcgagaatgggaa
gctgaaaagaaaaaagatgccaagaggaggaagatatga
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