Sorghum bicolor (sorghum): 8071953
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Entry
8071953 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
8071953
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8071953
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8071953
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8071953
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8071953
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8071953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
8071953
NCBI-ProteinID:
XP_002450997
UniProt:
C5Y4X8
LinkDB
All DBs
Position
5:complement(63781784..63796739)
Genome browser
AA seq
1118 aa
AA seq
DB search
MTMVTPPTVEHEDEEMLVPAQEVAAADTDAAQPMEVVAQTEVVSTAESQPVEDPQTSRFT
WTIENFTRFNGKKHYSEVFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSANLPYGWSRYA
QFSLAVVNQIQPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDASRGYLVNDTVVVEAE
VAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP
SGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMK
GTVVEGTIEQLFEGHHINYIECINVEYKSNRKESFYDLQLDVKGCRDIYSSFDKYVEVER
LEGDNKYHAENHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLD
LDRDDGKYLAPDADRSTRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTK
EDAKKALEEQYGGEEELPQINPGFNNAPFKFTKYSNAYMLVYIRESDKEKIMCTVDEKDI
AEHLRVRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKDMYFDLVDHEKVRNF
RIQKQMPFSSFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLTLHEETQSVGQLREV
SNKAHNAELKLFLEVEVGLDLRPLPPPEKGKEDILLFFKLYNPEKEELRFMGRLFVKALG
KPSEILAKLNEMAGFSPDQEIELYEEIKFEPNVMCEIIDKKLTFRSSQLEDGDIVCFQKS
PGAEYDAQVRYPDVPSFLEYVHNRQVVHFRSLEKPKDDDFSLELSKLHTYDDVVERVARQ
LELDDPAKIRLTSHNCYSQQPKPQPVKYRVEHLLDMLIHYNQTSDILYYEVLDIPLPELQ
FLKTLKVAFHHPTKDEVVIHSIRLPKNSTIADVINDLKTKVELSSPNAELRVLEVFYHKI
YKIFPLQEKIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFMKDINQTQQIQNFGDP
FFLLIHEGETLAEVKKRIQSKLQVSADEFSKWKFAFISMNRPDYLQDSDVISTRFQRREV
YGAWEQYLGMEHTDTAPKRAYTVNQNRHSYEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactatggtgactcctcccactgtcgagcatgaggacgaggagatgctcgtgcccgcc
caggaggtggccgccgccgacaccgacgcagcacagcccatggaagtggtggcacagact
gaggtggtgagcacggcggagagccagcctgtggaagatccgcagacatcgcggttcaca
tggacaattgagaacttcaccaggttcaatgggaagaagcactattcagaggtttttgtc
gttggcggattcaaatggcgtgtgctgattttccccaaggggaacaatgtggaccatttc
tcaatgtacttggatgttgctgactcagccaacctcccgtatggttggagccgctatgct
cagtttagtcttgctgttgtaaaccagatccagccgaagtatacgatacgcaaagatacc
caacatcaatttaatgctcgtgagagtgattggggtttcacatcttttatgcctttgagt
gacctctatgatgcaagtagaggttaccttgtgaatgatactgttgttgtggaggccgag
gttgctgtccgcagaatggttgactattggacatatgactcaaaaaaggaaactggttat
gtgggtctgaaaaaccaaggagctacctgttatatgaactcccttctacaaacactatac
catataccgtacttcaggaaggctgtgtatcatatgccaaccactgaaaatgacatgcca
tcaggaagtattcctttggcactgcagagccttttctacaagctccagtacagtgacagt
agtgtagctacaaaagagctgaccaaatcttttggatgggacacatatgattctttcatg
cagcatgatgtacaagagctcaacagagttctctctgagaaacttgaggacaaaatgaag
ggaactgtcgtagaaggaacgattgagcaattatttgaaggtcaccacatcaattacatt
gagtgtataaatgttgagtataaatctaaccgcaaggagtccttttatgatcttcaactt
gacgtcaaaggttgtcgtgacatttactcgtcatttgataaatatgttgaagttgaacgc
ctagagggtgataacaagtatcacgcagagaatcatggtttacaggatgcgaagaagggc
gttcttttccttgattttccccctgttttgcaactccagctgaagcgctttgagtatgat
tatatgagagacaccatggttaagattaatgatcgctatgagttccctctgcaacttgat
ctggatagagatgatggcaaataccttgctccagatgcagatcgaagtacaagaaacctt
tacactcttcacagtgttcttgttcatagcggtggggtacatggtggtcactactatgca
ttcatacggccaactctatccgagcaatggtataaatttgatgatgagcgtgtaacaaaa
gaagatgctaagaaggctcttgaagagcaatatgggggtgaggaagagttgccccaaata
aaccctggtttcaacaatgctccatttaaattcacgaagtattcaaacgcgtatatgctt
gtttatattcgtgaaagtgacaaggagaaaattatgtgtactgttgatgaaaaagacatt
gctgagcatttaagggtaaggttgaaaaaagaacaagaagagaaagaacacaaaaagaaa
gaaaaagctgaagctcatctttataccataattaaggtagctcgagatgaggatttgaag
gaacaaattggaaaggatatgtattttgatttggtggaccatgaaaaagtccgtaatttc
cgtatacagaaacaaatgccttttagttctttcaaggaggaagttgccaaggaatatggc
atccctgtgcagtttcagcgcttctggttgtgggccaagaggcaaaaccatacataccgc
cctaatcgtccattgacccttcatgaggaaacacaatctgtggggcaactgagggaggta
tcaaataaggcacacaatgctgagttaaagctgtttttggaagtagaagttgggctggat
ttgcggcctctccctcctcctgagaagggcaaggaagatattcttcttttcttcaaactc
tacaacccggaaaaggaagaacttcgttttatgggtaggcttttcgtgaaggccttgggc
aaaccttcagaaatactggcaaaactaaacgaaatggctggattttcccctgaccaagaa
attgagctttatgaggaaattaagtttgagccaaacgtgatgtgcgaaattattgacaag
aagctcacttttcgttctagtcagcttgaagatggggacattgtctgtttccaaaaatca
ccaggagcagaatatgatgcacaagtgcgatatccagatgttccttcatttttggagtat
gtccataataggcaggttgtgcatttccggtctttggagaaaccaaaggatgatgatttt
tctttggaattgtcaaagcttcatacctatgatgatgttgttgagagagttgctcgccaa
cttgaattggatgatccagcgaaaattcggcttacatcccacaattgctactctcagcaa
cctaaaccacaacctgtcaaatatcgagtggagcatctgttggacatgctcatccattat
aatcagacgtctgacatcttgtattatgaagtgttggatataccactgccagaattgcag
ttcctaaaaaccctgaaagtcgcatttcaccatcctacgaaggatgaggttgttattcat
agcatcaggcttccaaaaaatagcaccattgctgatgtaataaatgacttgaaaactaag
gttgaactgtccagtcctaatgctgaactacgtgtgctagaagtcttttaccacaagatc
tataagatctttccactacaagagaagatagagaatataaatgatcaatattggacacta
cgtgccgaggagattccagaagaggagaaaaatataggtccaaatgatcggctaattcat
gtttatcacttcatgaaagatattaatcagactcagcaaattcagaacttcggagaccct
ttctttctgcttattcatgaaggtgagactttagcagaagtcaagaagcgcatacagagt
aaactgcaagtctctgctgatgaattttccaagtggaaatttgcgtttatatcgatgaat
cggccagactacctccaggattcagatgttatatctactcgctttcagaggagagaggtc
tatggagcttgggagcaatatcttgggatggagcacactgatactgcaccaaaaagggct
tatacagtgaatcagaaccgtcactcatacgagaagccagtcaaaatttacaattga
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integrated database retrieval system
