Sorghum bicolor (sorghum): 8072002
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Entry
8072002 CDS
T01086
Name
(RefSeq) glycerophosphodiester phosphodiesterase GDPD1, chloroplastic
KO
K18696
glycerophosphodiester phosphodiesterase [EC:
3.1.4.46
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
8072002
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.46 glycerophosphodiester phosphodiesterase
8072002
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Motif
Pfam:
GDPD
Motif
Other DBs
NCBI-GeneID:
8072002
NCBI-ProteinID:
XP_002446326
UniProt:
C5YEV9
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Position
6:39648549..39651971
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AA seq
406 aa
AA seq
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MAKLKAARATDVPSALPPEPDIAADLDGLAAAASSCSCIRAGAAEATTTAAEGRPLVVIG
HRGKGMNTLVSPDPRLRGDVRENTLRAFNDAAASHPAVAYVEFDVQVTKDGCPVIFHDNF
IYTQQDGEISGKRVTDLDLDEFLSYGPQREQGKAGKPLFRKLKDGRILKWDVRSEDALCT
LREVFHGVHRRVGFNVELKFDDDLVYTEDSLTCILQAVLKVVLEHAGDRPIIFSSFQPDA
AQLIRKLQDKYPVFFLTNGGTQVYADQRRNSLEEAVKLCVAGGLQGIVSEVRAILRQPSA
VAEIKDANKLSLMTYGQLNNVPEVVYVQHLMGVDGVIVDLVGEIAEAVSAFTVTAVQASG
SQDGGGGVVGERMETAAALAVAAGTTPSFSPREMSFLLRLIPELVQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctaagctcaaggcggcgcgcgccaccgacgtcccgtccgccttgccgccggagccg
gacatcgccgcggacctcgacggcctagcagccgccgcgtcctcgtgctcgtgcatcaga
gcgggcgcggcggaggcgacgacgacggcagccgagggacggccgctggtggtgataggg
caccgcggcaaggggatgaacacgctggtgtcgccggacccgcggctgcgcggggacgtc
agggagaacaccctccgcgccttcaacgacgccgccgccagccaccccgccgtcgcctac
gtcgagttcgacgtccaggtgaccaaggacggctgccctgtcatcttccacgacaacttc
atctacacccaacaagacggcgaaatctcagggaagcgtgtcaccgaccttgacctggac
gaattcctctcctacgggccacaaagagagcaggggaaggccggcaagccacttttccgg
aagctcaaggacgggaggatcctcaagtgggacgtgcggtccgaggacgccctctgcacg
ctgcgtgaggtcttccatggcgtccaccgccgtgtcggcttcaacgtcgagctcaagttc
gacgacgacctcgtctacacggaggacagcctcacctgcatcctacaagccgtcctcaag
gttgtcttggagcacgccggcgacaggcccatcatcttctccagcttccagcccgacgcc
gcgcagctcatccgcaagctgcaagacaagtaccctgtgttcttcctgacgaacggaggg
acgcaggtgtacgccgaccagcgccggaactcgctggaggaggccgtcaagctgtgcgtc
gccggcgggctgcaggggatcgtgtccgaggtccgcgcgatactcaggcagccgtcggcg
gtggccgagatcaaggacgccaacaagctgtcgctcatgacctacggccagctcaacaac
gtgccggaggtggtgtacgtgcagcacctgatgggggtggacggcgtcatcgtcgacctg
gtgggggagatcgccgaggccgtgtcggcgttcacggtcacggccgtgcaggcgtcgggg
tcccaggatggcggcggcggcgtggtgggcgagaggatggagacggccgccgccctggcg
gtggcagcagggacgacgccgagcttctcgccgcgggagatgtccttcctgctgaggctc
attcccgagctagtgcagtag
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