Sorghum bicolor (sorghum): 8072202
Help
Entry
8072202 CDS
T01086
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8072202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8072202
03036 Chromosome and associated proteins [BR:
sbi03036
]
8072202
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8072202
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
8072202
PBAF complex
8072202
GBAF(ncBAF) complex
8072202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
8072202
NCBI-ProteinID:
XP_021310269
LinkDB
All DBs
Position
2:74746739..74748762
Genome browser
AA seq
532 aa
AA seq
DB search
MASGGNPNPTGAPTQPRPPHPQQQPQPGGSPATPMTHLRPPSHAGSPFQGLFHTPPTHNP
AFQIHMGASSSPQTPLMPATAGSAKRPPQKPPVRPPAPGSTSSAAAASAAAAYKAAAAAA
AVANSGGVDLTPAARRNKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARKKV
DIQEALKTPPSLQRTLRIYVFNTFANQGPRTIPPPKNADPPTWSLKIIGRVLEDGAELDP
ASVVPKHNPVYPKFSQFFKRVTIALDPSLYPENPLIIWENARTAAQQEGFEVKRKGDKEF
VANIRLEMNYNPEKFKLSPPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPNDPSFFMCD
PQLKKVFGEDKLKFAMLSQKISQHLTAPPPINLEHKIKLSGNGAHSSACYDVLVDVPFPL
QKEMMAFLANTEKHKDIEACDEVISASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQS
KDLKLVAGEANRNIEKERRADFYNQPWVEDAVIRYLNRKPANEGSGGGAGGS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggcggcaaccccaacccgaccggcgccccgactcagccgcgcccaccgcat
ccgcagcagcagcctcaaccgggcggctcaccggcaacgcccatgacccacctccgccct
ccctcccacgccggctcccccttccagggcctcttccacacgccgcccacccacaacccc
gccttccagatccacatgggcgcttcgtcctcgccccagactccgctcatgcccgccacc
gcaggctcggccaagcggcccccgcagaagccccccgtccggcccccggcccccggttct
acctcgtcggccgcggcagcctcggcggctgccgcgtacaaggctgcggctgcggcggcg
gccgtggccaactccgggggcgtcgaccttacccccgccgcgcggcgcaacaagaagcgc
aagctccccgagaagcagctccctgaccgcgtcgccgcgctgctcccagaatccgcgctc
tacacgcagctgctcgagttcgaggcccgcgtggacgccgcgctcgcgcggaagaaggta
gacatccaggaggcgctcaagacaccgccctcgctccagcgcacactccgcatctacgtc
ttcaacacctttgccaaccaggggccgcgcaccatcccaccacccaagaatgccgatccg
ccaacctggtcgctcaagatcattggtcgtgtgctggaggacggcgccgagctggatcct
gccagtgttgtgcccaagcacaacccagtgtaccccaagttctctcaattcttcaagagg
gtgacgattgcactggacccgtctctgtacccagagaatcccctcatcatctgggagaat
gcacgaacagctgcccagcaggaagggtttgaggtaaagaggaaaggggataaggagttt
gttgcaaacatccggctggagatgaactacaaccctgagaagttcaagctgtcacctccg
cttatggaggtgcttggggtggaggtggacactcgtgcacgggtgattgctgccctctgg
cagtatattaaagcaaagaagcttcagaacccaaatgatccttccttcttcatgtgtgac
cctcaattgaagaaggtgtttggggaggacaagctcaagtttgcaatgctgtcacagaag
atatctcagcatctgactgccccgccacccatcaacttggagcacaagattaagctttca
gggaatggagcgcatagcagtgcttgctatgatgtgctggtggatgttccattcccgctg
cagaaagagatgatggcgttccttgccaacacagagaagcacaaggacattgaggcttgc
gatgaggtgatatctgcttcgatcaagaagatccatgagcaccgcaggaggagagcgttc
ttcctgggtttcagccagtccccagtggagtttatcaatgcactgatagcttcccagagc
aaagatttaaagctggtcgccggcgaggcgaataggaatattgagaaggaaagacgtgct
gacttctataaccaaccatgggttgaagacgccgttataagatacttgaaccgcaaaccg
gctaatgagggctcaggtggtggtgctggtggttcttga
DBGET
integrated database retrieval system
