Sorghum bicolor (sorghum): 8072256
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Entry
8072256 CDS
T01086
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8072256
03036 Chromosome and associated proteins [BR:
sbi03036
]
8072256
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
8072256
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
8072256
SLIK complex
8072256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HTH_CHD1_Hrp3
CHD1-like_C
ResIII
HDA2-3
DEAD
SLIDE
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
8072256
NCBI-ProteinID:
XP_021310230
LinkDB
All DBs
Position
2:complement(75442681..75458434)
Genome browser
AA seq
1727 aa
AA seq
DB search
MAFFSNSGSKADSGGYNLNEKADDDGIYESDRDGNVDLNSRQWNLNEKADDAYHSEAEQY
EAGKSGLYSSENASGQHAQRGGRSSGGPWGTNFLKDSRSKQTAREVPSNSGRGMDAASSH
DDMDGSGEDDELDRANGEVPAEEMLSDDYYEQDGEEQIESLHRGGTKQSSCSTSGGAAKS
GSRQMKKTSKYNAYDDDDDDDEYNDENDDDNDADEDDPADVDFEPDSETDKPTDKDKFMD
SENSDGDDDDDLELSDDEDDDFVENRRQPKRLKIVATKTSKGRKLPMPAQRKRGVSHSDE
EYSSGKDSDVPSDSDFKHRSKKPDRLHQKPVGRSDVAPINSHNELRTSGRRRTVKKISYA
ESEESDDSEEKSTKQQKLMKEEPEEEDGETIEKVLWHQPKGVAEEAIRNHQSAQPTVVSL
TSNFDQQWDELEFYIKWKGQSYLHCQWKTLSELQNVSGFKKVINYTKRVAEEQRYKRALS
REEVEVHDVGKEMELDLIKQYSQVERIFADRVKADGDDLVPEYLVKWQGLPYAESTWEKD
TDIDFAQDAIDEYKAREAASAILGKTVDFQRKKSKASLRRLDDQPEWLKAGKLRDYQLEG
LNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLSTLSNWAKE
FRKWLPNMNVVIYVGNRASREMCQQHEFFSDKKGGRHVKFHTLITTYEVILKDKAVLSKI
KWNYLMVDEAHRLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPVKFN
SKDSFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQK
QYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSIGDRNKV
ERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVKMLDILAEYLSLRGFQFQRLDGSTRA
DLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR
IGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKESKKGGSIFDK
NELSAILRFGAEELFKEDKTDEETKRNLESLDIDEILERAEKVETKGGEGEEGNELLSAF
KVANFSSGEDDATFWSRLIQPDPADMIQETLAPRAARNKKSYVEDPQLDKSNNRKRRAVE
AQEKPRRRSGRTVETVNSLPLVDGAVAQVREWSFGNVPKKDASRFVRAVKKFGNATQIGL
IVDDVGGVLAKASHEAQIELFDLLIDGCQEAVKENTDIKGTVLDFFGVAVKAYELLARVE
ELQFLAKRIARYKDPIKQYRIQLPYKKPQWSASCGWTETDDARLMVGIHWYGYGNWEKIR
LDPKLGLAAKIAPATLGERETFLPRAPNLDNRASALLQKEYAKFSGKSSKVKGNARQTVN
NDSNSGARSMRGRQKDVPEKEDNKPNKDDIQKRKVIVEAEAREEGEISESEAETKYRLDK
EEKWLEWCSEVLDEEQDTLKRLDRLQNTSVNLPKEKVLSRIRKYLLIIGDKIGEVVRQHS
ESYRQSRMTMRLWNYVATFSNMSGEQLHDLYLKLSQDQLEGGVGPSHGGNFASVPPNKGG
NSNQLHPSRNQRPSRSLQYNSESFHNNESSGSSEAWKRRRRADLDNQFDTQPLYQPPVMT
NGNRLQESSSSAGILGWGPVEMRRYGNERPKRGVHPSHFSTGHGPLL
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcagcaactccgggagcaaggccgattcaggagggtacaacttgaatgaa
aaggctgatgatgatggtatctacgagtcagaccgggatgggaatgttgacctgaactct
aggcagtggaacttaaatgagaaagcagatgatgcctaccacagcgaagcagagcaatat
gaggctggcaaatcaggtttgtactcttctgagaacgcatcagggcagcatgcccagaga
ggaggcagatcgtctggtggtccatggggcacaaattttctgaaggattccaggtccaaa
cagacggccagagaagttccatcgaatagtggtaggggaatggatgctgctagctcacat
gatgacatggatggtagcggagaggacgatgaactggacagagcaaatggtgaggtgcct
gctgaggaaatgctctctgatgactattacgagcaggacggagaggagcagattgaatcg
ttgcatcgcggcgggacgaagcaatcaagctgttccacttctggtggagcagcaaagtct
ggctcacgacaaatgaagaagacgtcgaagtacaatgcttatgatgacgacgacgacgac
gatgagtataatgatgagaatgatgatgacaatgatgcagatgaagatgatcccgctgac
gtggattttgagccagacagtgaaacggacaagcctactgataaggataagtttatggat
agtgagaattctgatggtgacgacgatgatgaccttgaactctcagatgatgaagatgat
gattttgttgagaatcggaggcaacctaaaagacttaagattgtagcaactaaaacttcc
aagggaagaaagttgcccatgccagctcaaagaaaacgaggggtgtctcacagtgatgaa
gaatattcttcaggaaaagactcagatgttcctagcgattctgatttcaaacacagatcg
aaaaaacctgacaggttgcatcagaaacctgtgggccgcagtgacgttgctccaatcaat
tctcataatgagcttcgaacttctggaaggaggaggacggtgaaaaagatctcatatgct
gaaagcgaagaaagtgatgatagtgaggagaagtcaactaaacaacaaaagctcatgaag
gaggagccggaagaggaagatggagaaacaatcgaaaaagttctttggcatcaacccaag
ggtgtagctgaagaggcaataaggaatcaccagtcagctcaacctactgttgtcagccta
acatcgaacttcgatcaacagtgggatgagttagagttctatataaaatggaaaggccag
tcttacctgcattgtcaatggaagacattatcagaactccaaaatgttagtggattcaag
aaggtaataaattacacgaaaagagtcgccgaggaacagaggtacaagagggcactatca
cgtgaagaggttgaggtgcatgatgtgggcaaggagatggagctggatcttattaaacaa
tatagtcaggttgaacggatatttgctgatagggtcaaagctgatggagatgatctggtt
cccgaatatttagtcaaatggcaaggacttccttatgcagaatctacctgggaaaaagat
acagacatagattttgctcaagatgcaattgatgaatataaggctcgtgaagctgcctca
gctatacttgggaaaacagtagatttccaacggaagaaaagcaaggctagtttgaggagg
cttgatgaccagccagaatggctaaaagctggcaagcttcgtgattatcagctggaagga
ctaaacttccttgtcaatgggtggagaaacgatactaatgttatacttgctgatgaaatg
ggtctgggaaaaactatccaatctgtttccatgcttggcttccttcataatgctcaagaa
atcaatggcccatttcttgtagttgtgccactgtcaacattgtcgaactgggcaaaggaa
tttcggaagtggctgcccaacatgaatgttgtcatttatgttggcaaccgtgccagcaga
gagatgtgccagcagcatgaatttttttcagacaagaagggtgggcgtcatgtaaaattc
cacacattgataactacctacgaggtgattctcaaggacaaagcggttctttccaagatc
aaatggaactatcttatggttgatgaagcccaccgattgaaaaattgtgaagcgtcactg
tatacgacccttttggaattcagcactaagaacaagctgcttatcactggaacacctttg
cagaacagtgtggaagagctttgggcattacttcattttcttgatccagtcaaattcaac
agcaaggatagttttgttgagagatacaaaaatttgagttcgttcaacgaaactgagctt
gcaaatttgcataaggaattgaggcctcatattctacggcgggttataaaagatgttgag
aagtcgttacctcctaaaattgagaggattctacgtgtcgagatgtcaccccttcagaaa
cagtactacaagtggattttagagcggaattttcagaatctaaataaaggagtccgtggg
aatcaggtatcacttcttaacattgttgttgaattgaagaaatgctgcaaccatccattc
ctgtttgaaagtgccgatcatggttatggtggagatagcattggtgatcggaataaagtt
gaacgcattgttatgagtagtggtaaacttgtcttgttggacaaactattggtgagattg
cgggagactaaccatcgtgtgcttatattctcacagatggttaagatgttggacatcctt
gcagaatacctctctcttcggggatttcagtttcagaggcttgatggtagtacaagagca
gatcttcgtcatcaagccatggaacattttaatgctcctggaagtgatgacttctgtttt
cttttatccacacgtgccggaggacttggtattaatcttgcaactgcagatacagtgata
atttttgattcagattggaatccgcaaaatgatctgcaggccatgagtagggcacatagg
attggccaacaggagactgttaatatctaccgctttgtcacatgcaaaagtgttgaagag
gatattttggaacgtgcaaagaaaaagatggttcttgatcacttggttattcagaagcta
aatgctgagggcaggcttgagaagaaagaatccaaaaagggtggctccatatttgacaag
aatgaactttctgctatcttgaggttcggtgcagaggaattgttcaaagaagacaagact
gatgaggagaccaagaggaaccttgaaagtttggacattgatgaaattcttgagagagct
gagaaagtcgagacaaagggtggtgaaggggaggaaggaaatgagcttcttagtgctttc
aaggttgcaaacttttccagtggcgaagatgatgcaacattctggagtaggctgatacag
ccagatcctgcagatatgattcaggaaacattggcacctcgtgctgcacgaaataaaaag
agctatgttgaagatccccagctcgacaaaagtaataacaggaaaagacgagcagttgaa
gcacaagaaaagccaaggaggcgttctggcagaactgtggaaacagttaattcattacca
ttggttgatggagcagtagctcaagtacgagagtggtcttttggtaatgttccaaagaag
gacgcttctcgttttgtacgagcggtcaaaaaatttgggaatgcaacccagattggatta
atcgtggatgatgttggtggtgtacttgcgaaggcatcacatgaagcgcaaatagagcta
tttgatttgctaattgatggttgtcaggaagcagttaaagagaatacggatatcaagggc
acagttttggattttttcggtgtagctgtgaaggcctatgaattgctagctcgtgttgaa
gagcttcagttcttggcaaagcgaattgcacgttacaaagatccaatcaagcaataccgc
atccagctaccttataaaaagcctcagtggtctgcaagctgtggatggactgaaactgat
gatgctagattgatggttggaattcattggtatggctatgggaattgggagaaaatacgg
ttggatccaaagcttggcctggcagcaaaaattgcaccagcaacacttggtgagagagag
acatttttaccacgtgctccaaacttggataaccgagctagtgctctcctgcaaaaggaa
tatgctaagtttagtggtaagagctcaaaagtcaaaggaaatgcccgccagacagtcaat
aacgacagtaatagtggagctcgatcaatgaggggccgacaaaaggatgtaccagaaaaa
gaggataataaaccgaacaaagatgacattcagaagcgcaaggtaatagtggaagctgaa
gcaagagaagaaggtgaaatttctgaatcagaggcagagacaaagtatcgtctggacaaa
gaggagaagtggctggagtggtgctctgaagttttagatgaggagcaggatactttgaag
cgcctggataggctgcagaatacaagtgtaaacctcccaaaggaaaaggttctttcaaga
attcgcaagtatctcctgataattggggacaaaattggagaagttgtccggcaacacagt
gaatcttataggcaatcccgcatgaccatgaggttatggaattatgttgccaccttttca
aatatgtctggggagcaactgcatgatctctatttgaaacttagtcaagaccaactggaa
ggtggagttggcccatctcatggtggcaattttgcatccgttcctcccaataagggaggc
aactcaaatcaacttcatccttcgagaaaccaaaggccaagtaggtctctccagtacaat
tctgagtctttccataataatgagagctctggaagttctgaagcctggaagcgacgacga
agagctgacctagataatcaatttgacacccagcctttgtatcaacctccagttatgaca
aatggtaataggttgcaggaatctagtagttctgcaggtattcttggttggggtccagtt
gaaatgagacggtatggtaatgaaaggccaaaacgtggtgttcatcctagtcatttttct
actgggcatggacctttgctgtag
DBGET
integrated database retrieval system
