Sorghum bicolor (sorghum): 8072340
Help
Entry
8072340 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8072340 isoform X3
KO
K00602
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:
2.1.2.3
3.5.4.10
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00230
Purine metabolism
sbi00670
One carbon pool by folate
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
8072340
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
8072340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8072340
Enzymes [BR:
sbi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.3 phosphoribosylaminoimidazolecarboxamide formyltransferase
8072340
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.10 IMP cyclohydrolase
8072340
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8072340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AICARFT_IMPCHas
MGS
DUF6944
Motif
Other DBs
NCBI-GeneID:
8072340
NCBI-ProteinID:
XP_002448523
LinkDB
All DBs
Position
6:complement(56193499..56197635)
Genome browser
AA seq
594 aa
AA seq
DB search
MPLHLLSSPAAAAKLAAGLRAAPLRRCHSFAPAPRHTDRVALASSLSVAARSASPAVAAA
QTELSVSGKKQVLISLSDKTDLAYLGNGLQGLGYSIVSTGGTASSLEAAGVSVTKVEEIT
HFPEMLDGRVKTLHPSIHGGILARRDQEHHLKALKDHGIGTFDVVVVNLYPFYDKVTSGN
ISFEDGIENIDIGGPTMIRAAAKNHKDVLIVVDHNDYPALLEYLKGKQEDQQFRRMLAWK
AFQHVASYDSVVSEWFWKQSNKVGEMFPPSFTVPLELKSTLRYGENPHQSAAFYADKSLS
RVGAGGIATAIQHHGKEMSYNNYLDADAAWNCVSEFDSPTCVVVKHTNPCGVASRQDILE
AYRLAVKGDAVSAFGGIVAFNTTIDEDLAKEIREFRSPTDGQTRMFYEIVVAPGYTDKGL
EILRGKSKTLRILEAKRSGKGMLSLRQVSGGWLAQESDDLTPEEITFTAKSERSPQENEL
ADAKFAWLCAKHVKSNAIVIAKNNCMLGMGSGQPNRRESVRIAFRKAGEEAKGAALASDA
FFPFAWNDAVEEACQNGIGIIAQPGGSKKDEDAIACCNKYGVSLVLTGVRHFKH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccacctgctctcgtccccggccgccgccgccaagctcgccgcaggcctgcgc
gcggcgcctctccgtcgctgccacagcttcgccccggcgccgcgccacacggaccgtgtg
gccctggcgtcgtccctctcggtggcggcgcggtctgcaagccccgccgtggctgcggcg
cagaccgagctcagcgtttcaggaaagaaacaagtattgatatcgttgtcggataaaacg
gacttggcttatcttggcaacggtcttcagggtttggggtattccatcgtctccaccggt
ggaacagcatccagcctggaagcagcaggagtcagtgtaacaaaagttgaagaaatcaca
catttccctgaaatgcttgatggacgagtgaaaacattgcatccaagtatacatggtggt
attcttgccaggagagaccaggagcatcatttgaaggcactgaaggatcatggaattggg
acatttgatgtggttgtggtgaatttgtatcccttttatgacaaagtcacctctggtaac
atctcttttgaggatggcattgaaaatattgatattggtggtcccacaatgatcagagct
gcagccaagaaccataaggatgttcttattgtggtggatcataatgattaccctgcttta
ctggagtaccttaaaggaaagcaagaggatcagcagttccgcaggatgttggcatggaaa
gctttccagcatgttgcctcttacgattctgttgtgtcagaatggttttggaagcaatcg
aataaagtaggagagatgtttcccccaagctttactgtgccacttgagctgaagtctaca
ctccggtatggcgaaaatcctcatcagagtgctgcgttctatgctgacaagagcctttct
cgtgttggtgctggtggtattgccactgctattcaacaccatggaaaggaaatgtcttac
aacaattacttggatgcggatgctgcatggaactgcgtatcagagtttgatagtcctact
tgtgttgtggtgaagcacacaaatccatgtggcgttgcttcacgacaggacattcttgaa
gcttacaggttagctgtaaagggagatgccgtcagtgcatttggtgggatagttgcattc
aacacaacaattgatgaggatcttgcgaaggaaattcgtgagttcaggagtcctacagat
ggtcagacacggatgttctatgagatagtggttgctcccggctatacagataagggtctt
gagattctccgaggcaagtcaaagacgctgagaatacttgaggcgaagagaagtggaaaa
gggatgctttcactcaggcaggtgagtggtgggtggttggctcaggagtctgatgatcta
acccctgaagagatcacctttactgcaaagtctgagaggtctccgcaagaaaacgagctt
gccgatgccaaatttgcctggctttgcgcaaaacatgtcaagagcaatgccattgtgata
gccaagaacaactgcatgctgggaatgggcagtggtcagccaaacagacgagagagcgtc
agaatcgccttcaggaaggcaggagaagaggccaagggagctgcattggctagcgacgcc
ttctttccttttgcctggaacgacgccgttgaggaggcgtgtcagaatggcatcggaatc
atcgctcagccaggaggcagtaagaaggacgaggacgccatcgcgtgctgcaacaagtac
ggcgtgtcgctcgtcctcaccggcgttagacacttcaagcattag
DBGET
integrated database retrieval system
