KEGG   Sorghum bicolor (sorghum): 8072354
Entry
8072354           CDS       T01086                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    8072354
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sbi01001]
    8072354
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbi03032]
    8072354
   03036 Chromosome and associated proteins [BR:sbi03036]
    8072354
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8072354
Enzymes [BR:sbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     8072354
Protein kinases [BR:sbi01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   8072354
DNA replication proteins [BR:sbi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    8072354
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    8072354
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    8072354
SSDB
Motif
Pfam: TPR_ATM PI3_PI4_kinase FATC FAT HEAT_ATR
Other DBs
NCBI-GeneID: 8072354
NCBI-ProteinID: XP_021311686
LinkDB
Position
3:complement(9247186..9318774)
AA seq 3035 aa
MAVVATARDVEEVIQKLHSDRARVRDEGVKLLGTWLQDDRAASFCRLLSRNTARFKPGHG
NLTGATTWPLLVLALINCVKEDISGKKRGATKSAAARMFRVAVQCAEDLKLSGHSLLLFS
IAKQLFIHIWEVIKDGPSFQLEYSIILRQLLNVKEYRYQMKPRIYSNFVSLYMKKVATGF
DAKFSNPASSKDESFRCTLTLHVLLENPPGDYPDIMREEVLNGFSAVFLHIREEGKLTRK
LMECINTFLLKDGPNLGYKSVKIHNSVQEFIFRCWLATHDQALKSLFITYAKVQLKIAKN
IPEILEKLVDIITKELDKNVNTGPGLLWCEAPRDEKAVSLRCFQEEWMDLSATVFYLACK
CTTKTTNREKRLKTEHIMNLIVDGLFRGSLFWSGSICFLIHKYGYHMDKSLLISWFEASC
KALRSILSHANAIRFQDSLLWLLRTFTEFSTVLIFNSREKVQFCLTKGEMSIVEDGWQAI
WNSLVHALPLLSSIDLVADSALILLGGMIVRNQVHTPFLSEDTWNLQIFKQFPSPSALYF
VACYFSRIGFQGDLSNSIFVRKTLLRSTLELIHSKEFSLLNEQNVVIIPEAIFSLCAGFS
SSAINSSDVLQLFGDCKIYSKMSLEDDNWVLKDELPYSVEALSEITLDTCTKVTSHKCHR
IHLPGTIRQPMLLELMEFIKGFVVSNEQFEKVDLNNLVLVCSLLCNLIHCALLSRSMEEK
SSLLQEAVDYITNILKHIVAFVMKKNDGLSHGLTNLSSALDTTGSTLSSIKSLLSSPIFN
LSRVDNRVCSVVIKSITELLDELLVAISQLFCQISSLVSNFDAESTGKVLPTSSVNSEDL
NPILDCKSSVADMDLDVMDSGELDSVKASASGSMGNFLRPLEWKLDLVCIISTFFSVSSL
HTWEILYSLLEKENDVKVRQVILLNLCRNISASKTVSSVVHLIIDMRDRGASSLLGPAEC
LTHIHALLKTLIAIRDGGQNADGKPPGREVFFSENQDIIFDLVNKATEINSVDWFSRIKL
IDCVSSFVCLFPDVAQGLIGCLLDMLHDADYRVRLYLARQIVVLFQTWEGHNELFNDVCS
SIGAKMVKFSDISPVTAREVLAAGPQSVPIIETALITLAHLAVHSEDVEVECVFMISAAA
AIEPSQRELAFALFDSMSRRLGYASRSKYLDQVMGPILFRWVACEMNLVSLVEVQEMFGY
GSAEPKNFVEHCSSWLLPFLILRGDGADMNWISKILSQPLSIIIKKYFVPIFGLCIAVRC
GTGPEKDLAETVLCESVLQLGEISEVERDDLIKKHMVAIVAFLLSVSSSAHEPQIPYFSK
ENVALSVRMVVDGFVDTMDDNLADTVVIDKINIFRADRVFKFLLSIHQQVADASHPRHMG
HRLCAIEVLIDVLGHRVVLESTCFYIISIVGNYIQQKPLQGQCCNILSKVLAAFDGNTSA
ETLEVLGRQLQVVVPKLVISCLVNEKEERSGTEDSSRVLSLLRQLTVEADPLLYDYIREL
EPLPDLDCLKDVQEFHASLSASHSSRDQFLKFVNKAPYLPPELFLLRPWIEKVELEGILV
LYAHHLLITTFESLRAYHKKLLLGEIIRRSDLSVADADMVSCWRSDPDVISAVWALVDLC
SSSSIANEASSVLADFISRAGISDAHQVIFRLPTPTENYPLQLHTSSASKEDKISPDYGI
SDDVLVVLLKLLKTYLSDESVEIIDAASQTLRGILSTSRGLNALQFLDSLDRSLLMVHSR
GVNIQIVEQTISQMEQCAGVSLEDADVWQTEGRTYKQWLCTLVSSLICHCDDIILRLCRN
LVFLKVKAAELLLASTLVNIASNVDSNAVICRLISTKVEKIIFSDSNHSLKSIHLFLDAL
NVIRSFYVAEKARTFPSNTLKDGRSARSKSRSPATTPSSSWKRVYWLSVDYLVAAKAASR
CSCDFAVLMYVELWCEEQFNRLALGPPEFSHEESLPPHVGLLVAAFTRINEPDSIYGLTL
ANEIASQLIRYEHEGDWSSALEYYDLLVRSTPKEHLGNLTGSVLTGPSTVSSRAEDTTLN
WKMHKGLMRSLQKTGCSHVLDVYCEGLTHQKGCLQQDAEFIDIQYEAAWRAGNWDFSFFI
PYSSSSSTRTRSYCLFNENLHSCLRALQNGDSEEFHAKLCQTKMDLVLALSNTSKESTKY
IHSTILKLQILDHATMVWDLRWNLNPNQTSKSSVTKEFSHISTIPTGIQLELLDKEWNLI
VFQAERNLDLFEPFLAFRRALLKILGCEEHLVKHLFQSASALRKGLRFSLAAAALYELKE
LCFHRDEGTMPNTYFLSRLEEAKLLRAQGQHDMAISLGKYILQKHSDKKNLSDVYRLVGK
WLAETRSSNSRTIIEDYLRPSVDLSEFEKSTDKRYMSRQCRTHFHLAHYTYSLFRSYEER
LSSNEWQAALRLRKYKTRELETLIKRLRSSSKGVKTDYSVKIQELQKQLALDREEAEKIQ
DDRDNFLNLALQGYQRSIVVGGKYDLQVVFRLVSLWFSLFSRDQVVKAMLKTTKEVQTYK
FIPLVYQIASRLGSSKDAQGSTNFQIALASLLKKMAVDHPYHTIFQLLALANGDRVKDKQ
RSRSSFVVDMEKKLAAENLLKELSSCHGPLIRQMKQMVEIYIKLAELETKKEDTNKKIPL
PREARSIGQLELVPVVTATVPVDPSCRYEEGSFPHFTGLTDSVMIMNGINAPKVVECFGS
DGNKYRQLAKSGNDDLRQDAVMEQFFSLVNTFLQNHRDTSERRLRIRTYKVVPFTPSAGV
VEWVNGTVPLGDYLIGSTRTGGAHGRYGIGDWTYLQCREYLMSEKDKRRAFRKICDNFRP
VMHHFFLERFLLPADWFQSRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQDTAEVVHID
LGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGVFRRCCEKTLSVMRANKEALLTII
EVFVHDPLYKWALSPLKALQRQKETDDTDSCLDDSQEAYDGNKDAARAILRVKQKLDGYE
DGEMRSVQGQVQQLIQDAVDVDRLCQMFPGWGPWL
NT seq 9108 nt   +upstreamnt  +downstreamnt
atggcggtcgtggcgaccgcgcgcgacgtggaagaggtcatccagaagctccactctgat
cgggccagagtccgcgatgagggggtgaagctgctggggacatggctgcaggatgaccgc
gctgcgtccttctgccgcctcctcagccgcaacactgccaggttcaagcccggccacggg
aaccttaccggcgccaccacatggccgctccttgtcctggcgctcatcaactgcgtcaag
gaggacatctcgggtaagaagcgtggtgccaccaagagcgctgccgcccggatgttccgc
gttgctgtccagtgcgcggaggacctgaagctatcagggcattcactacttttgttctct
attgctaagcaacttttcattcatatatgggaggtcataaaagatggccccagctttcag
ttagagtacagcataattcttagacagcttctaaatgtgaaggagtaccgctatcagatg
aaacctcggatatatagcaattttgtatcactctacatgaagaaggttgctactggtttt
gatgcaaaattcagcaatccggcgagctccaaggatgaatccttccgctgtacattgaca
cttcatgttctacttgaaaacccaccgggtgattaccccgatattatgcgggaggaggtt
cttaacggatttagtgcagttttcttacatattagggaggagggaaagctgactcgcaaa
cttatggaatgcattaacacctttttactaaaggatgggccaaacctgggatacaaatct
gtgaagatccataattcagttcaagagtttatattccgttgttggctggcaactcatgat
caggccttgaagagtttgttcataacctatgcgaaagttcagctgaagattgccaagaat
attccagagattttggaaaaacttgtagacatcatcactaaggaactagacaaaaatgtt
aacaccggacctggtcttctatggtgtgaggcaccacgagatgagaaagctgtgtcctta
aggtgcttccaagaggaatggatggatctctctgctactgttttttatctggcctgcaaa
tgcacaacgaagacaacaaacagggagaaaaggctgaagacagaacacattatgaacctt
atcgttgatggcctttttagaggatctttgttttggagcggttccatttgttttctgatt
cacaagtatggatatcatatggacaaatctttgctaattagttggtttgaagcaagttgc
aaagctttgagaagtatcttgagccatgcaaatgccatacgatttcaggattcactactc
tggcttctcaggacattcacggagttctccacagtgctcatttttaacagtagggagaaa
gtacaattttgtttaacaaaaggcgagatgtcaattgttgaagatggttggcaagccata
tggaattcccttgttcatgcacttccattgttaagcagcatagatctagttgctgattca
gctctgattttgctgggtggaatgatcgtgcggaaccaagttcatacaccatttctatca
gaggatacatggaacctgcaaatatttaaacaatttccatcgccgtctgctctgtatttt
gttgcctgttacttctcaaggataggctttcagggtgacttatccaattctatctttgtt
cggaagactctgttaagatcaactttggagttaattcattcaaaggaattctctcttttg
aatgaacaaaatgttgttatcattcctgaagctattttctcattgtgtgctggtttttca
tcatcagcaattaattcatcggatgtattgcaactgtttggtgattgtaaaatttattcc
aagatgtctcttgaggatgataactgggttctcaaagatgaactaccctactctgtggaa
gctttatcagaaatcactctggatacttgtaccaaggttacctctcataaatgccaccgt
atacatcttcctgggactatccggcaaccaatgctcctcgagctcatggaattcatcaaa
ggatttgtggtctcaaatgagcagtttgagaaagtggacttgaataatcttgttcttgtt
tgttctcttctatgcaatctgattcattgtgcattgttgtcaaggtctatggaagaaaaa
tcttcacttttgcaagaggcagtagattatatcaccaatattttaaagcatattgtggca
tttgttatgaagaagaatgatggactttctcatggtcttactaacctaagttcagcattg
gatacaacgggttctactttatcctcgatcaagagcttactgtcttctccaatatttaat
ctgtcaagagttgataatagagtttgttctgttgttatcaaaagcattactgaattactt
gatgaactcttggtggcaatttctcagctgttttgtcagatctctagtttagtgagcaat
tttgatgcagagagtactggtaaagtgctaccaacatccagtgtcaattcagaggaccta
aatcctattttggactgtaaaagtagtgttgctgatatggatctcgatgtgatggactct
ggtgaattagattctgtcaaggctagtgctagtggaagtatgggtaacttcttacgacct
ttggagtggaagctggatctagtttgcattatttcaacttttttctcagtttcatcactt
catacatgggaaattttgtacagcttgttggagaaagaaaatgatgtgaaggttcgtcag
gtcatcttgcttaacctttgcagaaacatctcagcatcaaaaactgtatcttcagtggtc
catcttataattgatatgagggacagaggtgcaagttcattacttggccctgcggagtgc
ttaactcatatacatgctttattaaaaacattgatagctatccgcgatggtgggcaaaat
gctgatggaaagccaccaggacgcgaagtgtttttcagtgagaaccaggatatcatattt
gacttggtaaataaggctacagagataaattctgtagattggttttcccgcatcaagctc
attgattgtgtctcctcctttgtttgcctgttccctgatgttgcccagggtttgatcgga
tgtttgcttgacatgctgcatgatgctgattaccgtgtcaggttatatttggctaggcaa
atcgtcgtgttattccaaacatgggaagggcacaatgaattatttaatgatgtttgctca
agcattggtgccaagatggtgaagttctcagatatttctccagttacagctagagaagtc
ttggctgctggtccacaatctgttcccataattgaaactgctctcattacactagctcat
ttggctgtgcatagcgaggatgttgaagttgagtgtgtgttcatgatttctgctgctgct
gctatagagccttctcagcgagaattagcttttgcgttatttgattccatgtcaaggagg
ctgggttatgcttcaagaagcaagtatctggaccaagtgatgggcccgattctttttcga
tgggttgcttgtgagatgaatctagtttcacttgttgaggtgcaagaaatgtttggttat
gggtctgctgagccaaagaactttgttgaacattgtagttcatggcttctcccattcctc
attctcaggggtgatggtgctgatatgaattggatatcaaagattttatctcaacctttg
tcaatcattatcaagaaatactttgttccaatctttggattgtgcattgctgtcagatgt
ggcacagggccagagaaggatttagctgaaactgtcttatgtgaatcagttttgcagctt
ggtgaaatttctgaggttgagcgtgatgatctcattaaaaaacatatggttgcgatcgtt
gcttttttgctctctgtttcatcatctgctcatgagccacaaattccatatttttccaag
gagaatgttgcactttcagtcagaatggttgttgatggatttgtggacacaatggatgat
aatttggctgatacagttgttattgataaaattaatatattccgtgctgacagagtattt
aagttcctgttgtcaatacatcagcaagttgcagatgctagccaccccaggcacatgggt
catcgtctttgtgcaattgaggttttaatagatgtacttggacaccgggtggttcttgag
agcacttgcttctatattatttctattgtggggaactatatccagcaaaaaccactgcaa
ggccagtgctgtaatattttgtctaaagtgttggctgcttttgatggaaacacctctgct
gaaaccctggaagtgcttggcaggcagcttcaggtagtagttccaaaattagttatttca
tgcctagtcaatgagaaagaagaaagaagtggtactgaagattcatcaagagttctttct
ttactccgtcaattgacagtggaggctgatcctctgctttatgattacataagagagtta
gaaccacttcctgatcttgattgcttgaaagatgtacaggagtttcatgcttcactttct
gcatcacattcttcaagagatcagttcttaaagtttgttaataaggctccttatttgcca
ccggagctatttttgttgaggccatggatagaaaaagttgaactcgagggaattttagtc
ctctacgcccatcatttattgatcactaccttcgaaagtcttcgtgcgtatcacaaaaag
ttattattgggagaaatcatccgtagaagtgacctatctgtggctgatgcagacatggtt
agctgctggcgtagcgacccagatgtcatttctgctgtatgggctcttgttgacctttgt
agctcatcatctatagcaaatgaagcttcttcagtgcttgctgattttatctctagggct
ggtatatctgatgcacatcaagtgatattccgtctgccaactcctaccgaaaactatcct
ttacaactacataccagttctgcttccaaggaggataaaatatccccagactatggtatt
tctgatgatgttttggttgtgcttctgaaactcttgaagacttatttatctgatgaatct
gttgaaataatagatgctgcttcacaaacactgaggggtattctatcaacatcaaggggg
ctcaatgctctgcagtttcttgattctcttgataggtctttactcatggttcattcgaga
ggtgtaaacattcagatagttgaacagactatatcgcaaatggaacagtgtgctggtgtt
tcacttgaagatgcagatgtgtggcaaactgaaggtcgaacttacaagcaatggctgtgc
accctagtgagctcacttatttgtcactgtgatgacatcattttgagactctgtaggaat
cttgtttttctcaaagttaaggctgctgagcttttgcttgcaagtactctagtgaacatt
gctagcaatgttgattctaatgctgtcatctgcagattaatttcaacaaaggttgagaaa
ataattttttctgactccaatcattcgttgaagtcaatccatctgtttctggatgcactg
aatgtcattagatctttttatgttgctgaaaaggccagaactttcccttctaatactctg
aaggatggtagatctgctagatcaaaaagtcgatcaccagcgacaaccccatcatcatca
tggaagagggtatactggctttctgttgattatcttgttgctgccaaagctgctagtcga
tgctcatgtgactttgccgtattaatgtatgttgagctttggtgtgaggaacaattcaat
aggctggcattaggacctccagagttttcccacgaagagtcgttgccgccacatgttggt
ctgttggttgctgcatttactcgcataaatgaaccggacagcatttatggactcacacta
gccaatgagatagcatctcagcttattagatatgagcatgaaggtgattggagtagtgca
cttgaatactacgatttactcgtaaggtcaacgccaaaggagcatcttggcaatttaact
gggtcggtgttgactggaccatctaccgtgtcttctagagcagaagatacaacgttgaac
tggaaaatgcacaaaggtcttatgagatccttgcagaaaactggatgtagtcatgtgctt
gatgtctactgtgaaggtttgactcaccaaaaagggtgtcttcaacaagacgcagagttt
attgatatccaatatgaagccgcttggagggcaggaaattgggatttctcctttttcatt
ccatattcttcttcgtcttcaacccgcactcgaagttactgtcttttcaatgaaaattta
cacagttgcttaagagctctgcagaatggtgattctgaggagttccatgcaaaactttgt
caaaccaagatggatcttgtcttggctttgtcaaacactagcaaggagagcacgaaatac
atccactcaaccatccttaaattacagattctagatcatgctactatggtttgggacctg
cgttggaaccttaatcccaatcaaacatcaaaatcttccgtaaccaaggaattttctcat
atatctactatccctacagggatacagttggagttgctggataaagagtggaacttaatt
gtgttccaagcagaacggaaccttgatctttttgaaccttttctggcatttaggcgtgcc
ctccttaagattttaggttgtgaagaacatcttgtaaaacatttatttcaatctgcttct
gcgctccggaagggattaaggttttctttggcagcggcagctttatatgagctcaaagaa
ctttgttttcacagagatgagggcactatgccaaatacctatttcctttcacggcttgaa
gaggctaaattgctcagagctcaagggcagcatgatatggctattagtcttggaaaatac
atactacagaagcattctgacaagaaaaacctgtcagatgtctatcgattagtgggaaag
tggctggctgaaacaagatcaagcaactcaagaactatcattgaggactatttaagacct
tctgtagatctctctgaatttgagaagagtacagataaaaggtacatgtccaggcagtgt
cgaacacatttccatctggcacattatacatatagtttgttcagaagctatgaggaaaga
ctctcatctaacgaatggcaagcagctctgcgattaaggaaatacaagactagggagttg
gagacactgattaaaagactcagaagttcatctaagggtgtgaagactgattactcggta
aaaatccaagagttacagaaacaacttgcacttgacagagaagaagcagagaagattcag
gatgatcgtgataatttcttaaacctagcgcttcaaggctaccaacgttcaattgttgtt
ggtggcaaatatgacctacaagtggttttccggttggtctcgctgtggtttagtcttttc
tcaagggatcaagttgtgaaagcaatgttgaaaacaacaaaagaggtccaaacctacaag
ttcataccactggtttatcaaattgcttcgagacttgggagctccaaagatgctcagggg
tcaactaacttccagattgcattagcttctcttttgaagaaaatggctgttgatcaccca
tatcatacaatattccagcttttggctctagcaaatggtgatcgtgtcaaagacaagcaa
agaagtagaagttcttttgttgtagatatggagaagaagcttgctgcagaaaatttatta
aaggagctgtcttcctgtcatggacctctaattcgtcagatgaaacaaatggttgagatc
tacattaagttagcagaactggagaccaagaaggaggacactaacaaaaaaattccactg
cccagggaggcccgcagcattggtcagcttgaactagttccagttgtgactgctactgtt
cctgttgatcctagctgtcgttatgaagaaggctcctttccacatttcactgggttgact
gactctgttatgatcatgaatggaattaatgctcccaaagttgtagaatgttttggctca
gatggtaacaaataccgccaacttgcaaaatctggaaatgatgacctgcgacaggatgct
gtgatggagcaattttttagtttggtaaatacattcttgcaaaatcaccgagatacttct
gaaaggaggttaagaatccgtacatataaggttgttcctttcaccccaagtgctggtgtt
gttgaatgggtaaatggtactgttccactaggcgattatctaattgggagtactagaact
ggtggagcacatggacgatatggaattggggactggacatatcttcaatgcagagagtac
ttgatgagtgaaaaggacaaaaggagggcatttcgtaaaatctgcgacaactttaggcct
gtgatgcaccacttctttcttgagagattcttgctgcctgcagattggttccaaagtaga
cttgcttacacaaggagtgtagcagcaagctcgatggtaggatatatcgtcggtcttggg
gatcgtcattccatgaatattctcatcgaccaagacacagctgaggttgtacacattgat
cttggtgttgcatttgaacagggtctcatgcttaaaacacctgaacgggttccatttcgg
ttgacaagggatattatagatggcatgggtgttactggtgttgaaggtgtgtttagaaga
tgttgtgagaaaactctctctgtcatgagggcgaataaagaagcattgctcactattatt
gaagttttcgttcatgatcctctatataaatgggcactctcaccactgaaagccttgcaa
cgtcaaaaggaaacagatgacactgattcatgtttggatgactcccaagaggcttacgat
ggcaacaaggatgcagctcgtgctatactccgtgttaaacagaagttggatggatatgaa
gatggcgagatgagaagtgtgcagggccaggtccaacaactcatacaggatgcggtggat
gttgatcggttgtgccaaatgtttccagggtggggaccttggttgtaa

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