Sorghum bicolor (sorghum): 8072417
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Entry
8072417 CDS
T01086
Name
(RefSeq) tyrosine decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00350
Tyrosine metabolism
sbi00360
Phenylalanine metabolism
sbi00380
Tryptophan metabolism
sbi00901
Indole alkaloid biosynthesis
sbi00950
Isoquinoline alkaloid biosynthesis
sbi00965
Betalain biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
8072417
00360 Phenylalanine metabolism
8072417
00380 Tryptophan metabolism
8072417
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
8072417
00950 Isoquinoline alkaloid biosynthesis
8072417
00965 Betalain biosynthesis
8072417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8072417
Enzymes [BR:
sbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
8072417
4.1.1.105 L-tryptophan decarboxylase
8072417
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8072417
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
8072417
NCBI-ProteinID:
XP_002457584
UniProt:
C5XFU6
LinkDB
All DBs
Position
3:complement(10498248..10500069)
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AA seq
509 aa
AA seq
DB search
MGSLPLDLPMKPLDPHAIAGDSQAILDFLAEYYRDVDKFPVRAADMEPGRVRKLLPEAAP
EHGEPMEHILEDVRRDILPGLTHWQSPRFFAFFPMNASSAGLAGEMLSVGLNVVPFVWAA
SPAAAELESVVVDWMARLFGLPRRFLFSGGGGGVLQGSTCEAVVCTLAAARDGALGRLGH
EAIARLVVYASDQTHATFQKGARLVGIPPSNFRVIKTSAASGYGLTAEAVRAAVDRDVGL
GLVPLYLCATVGTTGLGAVDPVREIGEEARRHGMWVHLDAAYAGSAAICPEFQDYLDGAE
LADSVSMNPHKWFLTNMDCCCLWVARPRDLISALSTDPEYLKNVGAEDGGAGTPAAVDYK
DWQISMTRRFRAIKLWVILRRYGAAGMRAHIRRHVAAAKWFEQRVAADERFEVVAPRRFS
LVCFRLAPRSGRDDDDDDTNHVNRDLLAAVNASGRAFMTHFVVDGKFVIRLAVGGASTEL
QHVMEVWDLLQAIAAEVLHRHSTIQRNEL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcttgccactggacttgccaatgaagccactggaccctcacgccatcgccggc
gactcgcaggcgattctagacttcctcgccgagtactaccgcgacgtggacaagttcccg
gtgcgggcggccgacatggagccaggccgcgtccgcaagctgctccccgaggccgcgcca
gagcacggcgagccgatggagcacatactggaggacgtgaggcgggacatcctgccgggg
ctcacccactggcagagcccccggttcttcgccttcttcccgatgaacgccagctccgct
gggctcgcgggggagatgctgtcggtcggcctcaacgtcgtgcccttcgtgtgggccgcg
tcgccggccgccgcggagctcgagagcgtcgtcgtcgactggatggcgcggctgttcggc
ctgccgcgccggttcctcttctccggcggcggcgggggcgtcctgcaggggagcacgtgc
gaggccgtggtgtgcacgctcgccgccgcgcgggacggcgcgctgggtaggctcgggcac
gaggccatcgccaggctggtggtctacgcctccgaccagacgcacgccacgttccagaag
ggcgcccggctcgtcgggatcccaccgtcgaacttccgggtcatcaagacgtcggcggct
tcagggtacggtctcaccgcggaagccgtccgcgccgccgtcgaccgcgacgtcggcctc
gggctggtgccgctctacctctgcgccacggtgggcacgacggggctcggcgccgtcgac
cccgttcgcgagatcggggaggaggcgcgccgccacggcatgtgggtgcaccttgacgca
gcgtacgccggcagcgcggccatctgcccggagttccaggactacctcgacggcgcggag
ctcgccgactcggtgagcatgaacccgcacaagtggttccttaccaacatggactgctgc
tgcctgtgggtggcaagaccccgtgacctgatctcggcgctgtccaccgatccggagtac
ctcaagaacgtcggcgcggaagacggcggcgcaggaacgccggccgccgtagactacaag
gactggcagatctccatgacgcgccggttccgtgccattaagctctgggtcatactgcgg
cggtacggtgcggctggcatgcgtgcgcacatccgtcggcacgtcgcagcagccaagtgg
ttcgagcagagggtggcggccgacgagcgcttcgaggtggtggccccgaggaggttctcc
ctggtatgcttccgcctcgcaccacggtccggccgggacgacgacgacgacgacacgaac
cacgtgaaccgggacctcctcgcggcggtgaacgcgagcgggcgggctttcatgacgcac
ttcgtggtggacggcaagttcgtgatccggctagctgtgggcggcgcctcgacggagctg
cagcacgtcatggaggtgtgggacctgctgcaggcaatagccgctgaggttctacacaga
cacagcactatccagcgtaacgagctctag
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