KEGG   Sorghum bicolor (sorghum): 8072556
Entry
8072556           CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8072556
  09124 Replication and repair
   03420 Nucleotide excision repair
    8072556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8072556
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8072556
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     8072556
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8072556
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB Zn_ribbon_4 Zn_ribbon_RPAB4 Zn_ribbon_3
Other DBs
NCBI-GeneID: 8072556
NCBI-ProteinID: XP_002441228
UniProt: A0A921QDN1 C5YZB6
LinkDB
Position
9:complement(52180880..52184999)
AA seq 114 aa
MSTMKFCRECNNILYPKEERDRRTLFFACRNCEHQEVSDNNCVYRNEVHHTAGERTQVLQ
DVASDPTLPRTKTVRCSACGHGEAVFFQATARGEEGMTLFFVCCSPDCGNRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagcaccatgaagttttgccgtgagtgcaacaacatcctgtaccccaaggaggagaga
gacaggcgcaccctattcttcgcatgtcgcaactgtgagcaccaggaggtctctgacaat
aactgcgtctatcggaacgaggtgcaccacactgctggggagcgaacgcaggtcttgcag
gatgtagcttctgaccccactcttcccagaaccaagactgttcgctgtagtgcttgtggg
catggagaggctgttttcttccaggccacagcaagaggggaggaggggatgaccctgttc
tttgtgtgctgcagcccagattgtggtaatcggtggagggaatga

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