KEGG   Sorghum bicolor (sorghum): 8072612
Entry
8072612           CDS       T01086                                 
Name
(RefSeq) SKP1-like protein 3
  KO
K03094  S-phase kinase-associated protein 1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03083  Polycomb repressive complex
sbi04120  Ubiquitin mediated proteolysis
sbi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8072612
   04120 Ubiquitin mediated proteolysis
    8072612
  09126 Chromosome
   03083 Polycomb repressive complex
    8072612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8072612
   04121 Ubiquitin system [BR:sbi04121]
    8072612
   03036 Chromosome and associated proteins [BR:sbi03036]
    8072612
Membrane trafficking [BR:sbi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    8072612
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     8072612
   Cul7 complex
     8072612
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     8072612
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     8072612
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB DUF2110
Other DBs
NCBI-GeneID: 8072612
NCBI-ProteinID: XP_002454041
UniProt: A0A921R5K3 C5XVL7
LinkDB
Position
4:complement(53957366..53958283)
AA seq 172 aa
MASEKKVVFLRSSDGEAFEVSEEVISAASVTIKGMIDEESPSRADTAATTTLAIPNVTAA
TLSRVLHYVNKHFDAAAVVGRPDDYIFCAPGDEHPLARFDDDFVDVDNDTLIDLVHAAEY
LHIKKLFDLTCKAVADKLKGRTIDQIRETFGIVNDYTVEEEVEVYRENSWAF
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcgtcggagaagaaggtggtcttcctccgcagctcggacggcgaggccttcgaggtg
tcggaggaggtcatcagcgccgcctcggtgacgatcaagggcatgatcgacgaggagtcg
ccgtcccgcgcggacaccgccgccaccaccacgctcgcgatcccgaacgtcaccgccgcc
acgctctcccgcgttctccactacgtcaataagcacttcgacgccgccgccgtcgtcggc
cggcccgacgactacatcttctgcgcacccggcgacgagcaccccctcgcccgcttcgat
gacgacttcgtcgacgtcgacaacgacacccttatcgacctggtacatgcggccgagtac
ctccacatcaagaagctgttcgacctgacgtgcaaggcggtggcggataagttgaaggga
aggacaatcgaccagatccgcgagacgtttggcatcgtcaacgactacactgtggaagag
gaggtggaggtttacagggagaactcgtgggcattctag

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