Sorghum bicolor (sorghum): 8072741
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Entry
8072741 CDS
T01086
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00061
Fatty acid biosynthesis
sbi00071
Fatty acid degradation
sbi01100
Metabolic pathways
sbi01212
Fatty acid metabolism
sbi04146
Peroxisome
Module
sbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8072741
00071 Fatty acid degradation
8072741
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8072741
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbi01004
]
8072741
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8072741
Enzymes [BR:
sbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8072741
Lipid biosynthesis proteins [BR:
sbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8072741
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
8072741
Exosomal proteins of breast cancer cells
8072741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
8072741
NCBI-ProteinID:
XP_002449082
UniProt:
C5Y5P5
LinkDB
All DBs
Position
5:5559718..5564825
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AA seq
697 aa
AA seq
DB search
MNPYFLGFILPFVASLLLTKRKSEKKRGVPVNVGGEPGCAIRNHRFERPVETRWEGISTL
AELFEQSCKQFACMPLLGTRKLIAREMVVAADGRSFEKLHLGNYEWKSYADAFKTVCNFA
SGLLRIGHLKDERVAIFADTRAEWQIALQACFRQNIAVVTIYASLGEGALCHSLNETEVT
TVVCGRKELKKLIDISGQLDTVKHVIYINEEGVSAEVSLAQNCTSWTVMSFEEVESIGLQ
RPVEENLPLASDTAVIMYTSGSTGMPKGVMMSHRNVLAVVSAVMTIVPGLGKKDVYLAYL
PLAHILELAAEAIITGVGASIGYGSPLTLTDTSNKIKKGTQGDASVLKPTLMTAVPAILD
HVRDGVRKNVDAKGGLAKRLFDIAYSRRLAAVNGSWLGAWGLEKLLWDMLVFQKVRAILG
GRIRFILAGGAPLSGDTQRFINICLGAPISQGYGLTETCAGGTFSEYDETSVGRVGPPLP
CSYIKLVDWAEGGYLTTDSPMPRGEIVIGGPSVTKGYFKNEAKTNEVYKVDERGMRWFYS
GDIGRLHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVCSYVDQIMIHADPFHNYCV
ALIVAAQSELKNWASKQGMTYSDFSDLCQKQGTVKEVLQSLVKAAKQARLEKFEIPAKIK
LIPEPWTPESGLVTAALKLKREVIKKAYEIDLAQLYS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctatttcttgggtttcattctcccttttgtggcgtctctgctgctcaccaag
aggaagtctgagaagaagaggggtgtgccagtcaatgtgggtggagagcctggctgcgcc
attcgtaaccacagatttgagaggcctgtcgagacgcgctgggaggggatttccacgctt
gctgagctatttgagcagtcatgcaaacagtttgcctgcatgcccctgcttggtaccagg
aagctcatcgcaagggaaatggtggtggccgccgacggaagatcctttgagaagctccat
ttgggaaattatgagtggaagagctatgctgatgcgttcaaaactgtctgcaacttcgct
tctggtcttctgcggattgggcacctgaaagatgagcgtgttgctatttttgctgataca
cgggctgagtggcagattgcgttgcaggcgtgcttcaggcaaaacattgcagttgtcaca
atctatgcctctttgggggagggagcgctatgtcactcactaaatgagactgaggtaact
actgttgtgtgcgggcggaaagaacttaaaaagctgattgatataagtgggcaacttgac
actgtgaaacatgtcatctacattaatgaggaaggtgtctcggctgaagtatccttggct
caaaactgtactagctggaccgtcatgtcatttgaggaggtagagagcataggattgcaa
agacctgtcgaagaaaacttgcctctcgcatcagatactgcagtgattatgtatacgagc
gggagcacaggaatgcctaagggagtcatgatgagccaccgaaatgttttggctgtagtt
tcagctgttatgaccattgtgcctggtcttggcaagaaggatgtgtacctggcatatctt
cccctagcacatatccttgaattggcagctgaggcaatcataactggtgttggggcttca
attggatatgggtcacctttgaccctgactgatacatcaaataaaataaaaaaagggacg
cagggtgatgcttctgtactgaagccaacactaatgactgctgtacctgctatacttgat
catgttcgtgatggtgtacgaaaaaatgtagatgcaaaaggtgggttagcgaagagatta
tttgatattgcctacagccgccgtctagctgctgttaatggaagctggttgggggcatgg
ggactagagaagctcttgtgggatatgcttgtgttccaaaaggttcgtgcaatcttagga
ggacggattcgctttattcttgcaggtggagcacctctgtcaggggacactcagagattt
atcaatatatgtcttggggctccaatatctcaaggatatggcctgactgaaacttgtgcc
ggtgggacattttcagagtacgatgaaacatctgttggccgtgttggtccccctctgcct
tgttcatacattaagttggtagactgggctgaaggtggatacttaacaactgattcacca
atgcctcgtggtgaaatagttattggaggtccaagtgtaactaaaggctacttcaaaaat
gaagcaaaaacaaatgaggtgtacaaggttgatgaaagaggcatgcggtggttctactct
ggtgacattgggcgcttgcaccctgacgggtgtcttgaaattattgaccgtaagaaggac
atagtcaagcttcaacatggtgaatatgtttctctaggaaaggtggaggctgctttgagt
gtgtgctcatacgttgaccagatcatgatccatgctgaccccttccacaactactgtgtc
gcgcttattgtagctgcacagagtgagttgaaaaactgggcctcaaaacaaggaatgaca
tatagtgatttctcagatttgtgccagaagcaagggacagtcaaagaagtcctccaatct
ttggtgaaggctgctaagcaagcacgactggagaaatttgagatcccagccaaaattaag
ttgataccagagccatggacgccggagtcaggcctcgttacggctgccctaaagctcaag
agggaggtcatcaagaaggcatacgagatagaccttgcccagttgtacagctaa
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